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Updated: Jun 18, 2026

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
A nuclear poly(ADP-ribose)-dependent signalosome confers DNA damage-induced IkappaB kinase activation
Michael Stilmann1, Michael Hinz, Seda Cöl Arslan
1Max Delbrück Center for Molecular Medicine, Robert-Rössle-Strasse 10, 13125 Berlin, Germany.
Abstract:
Upon genotoxic stresses, cells activate IkappaB kinases (IKKs) and the transcription factor NF-kappaB to modulate apoptotic responses. The SUMO-1 ligase PIASy and the kinase ataxia talengiectasia mutated (ATM) have been implicated to SUMOylate and phosphorylate nuclear IKKgamma (NEMO) in a consecutive mode of action, which in turn results in activation of cytoplasmic IKK holocomplexes. However, the nuclear signals and scaffold structures that initiate IKKgamma recruitment and activation are unknown. Here, we show that poly(ADP-ribose)-polymerase-1 (PARP-1) is the DNA proximal regulator, which senses DNA strand breaks and, through poly(ADP-ribose) (PAR) synthesis, assembles IKKgamma, PIASy, and ATM in a dynamic manner. Signalosome formation involves direct protein-protein interactions and binding to ADP-ribose polymers through PAR binding motifs (PARBM). Activated PARP-1 and a PARBM in PIASy are required to trigger IKKgamma SUMOylation, which in turn permits IKK and NF-kappaB activation, as well as NF-kappaB-regulated resistance to apoptosis.
Insights
Poly(ADP-ribose)-polymerase-1 (PARP-1) senses DNA breaks and initiates IKKgamma SUMOylation, activating IKK and NF-kappaB. This pathway enhances cellular resistance to apoptosis following genotoxic stress.
Area of Science:
- Cellular Biology
- Molecular Biology
- Genetics
Background:
- Genotoxic stresses activate IkappaB kinases (IKKs) and NF-kappaB to regulate apoptosis.
- Nuclear IKKgamma (NEMO) is SUMOylated and phosphorylated by PIASy and ATM, respectively, activating cytoplasmic IKKs.
- The nuclear signals initiating IKKgamma recruitment and activation remain unclear.
Purpose of the Study:
- To identify the nuclear signals and scaffold structures responsible for initiating IKKgamma recruitment and activation upon genotoxic stress.
- To elucidate the role of poly(ADP-ribose)-polymerase-1 (PARP-1) in the DNA damage response pathway involving IKKgamma.
Main Methods:
- Investigated protein-protein interactions and complex formation using biochemical assays.
- Utilized poly(ADP-ribose) (PAR) synthesis and PAR binding motifs (PARBM) in signalosome assembly.
- Assessed the requirement of activated PARP-1 and PIASy PARBM for IKKgamma SUMOylation and subsequent NF-kappaB activation.
Main Results:
- Identified PARP-1 as a DNA-proximal regulator that senses DNA strand breaks.
- Demonstrated that PARP-1, via PAR synthesis, dynamically assembles IKKgamma, PIASy, and ATM.
- Showed that activated PARP-1 and a PIASy PARBM are essential for IKKgamma SUMOylation, leading to IKK/NF-kappaB activation.
Conclusions:
- PARP-1 acts as a crucial scaffold, initiating the SUMOylation of IKKgamma (NEMO) in response to DNA damage.
- This PARP-1-mediated pathway activates the IKK/NF-kappaB signaling cascade, conferring resistance to apoptosis.
- The findings reveal a novel mechanism linking DNA damage sensing to the NF-kappaB pathway.
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