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Contrasting identity-by-descent estimators, association studies, and linkage analyses using the Framingham Heart
Elizabeth E Marchani1, Yanming Di, Yoonha Choi
1Division of Medical Genetics, Department of Medicine, University of Washington, Health Sciences Building, K-253, Box 357720, Seattle, Washington 98195 USA. em27@u.washington.edu.
None:
We explored the utility of population- and pedigree-based analyses using the Framingham Heart Study genome-wide 50 k single-nucleotide polymorphism marker data provided for Genetic Analysis Workshop 16. Our aims were: 1) to compare identity-by-descent sharing estimates from variable amounts of data; 2) to apply each of these estimates to a case-control association study designed to control for relatedness among samples; and 3) to contrast these results to those obtained using model-based and model-free linkage analysis methods.
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