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Screening Foodstuffs for Class 1 Integrons and Gene Cassettes
Published on: June 19, 2015
Molecular characterization of class 1 integrons in MDR Pseudomonas aeruginosa isolated from clinical settings in
Fereshteh Shahcheraghi1, Farzad Badmasti, Mohammad M Feizabadi
1Department of Microbiology, Pasteur Institute, Tehran, Iran. shahcheraghifereshteh@yahoo.com <shahcheraghifereshteh@yahoo.com>
Abstract:
Seven hundred and fifty nonreplicated clinical isolates of Pseudomonas aeruginosa were collected from five hospitals during March 2007 to May 2009. Forty-one isolates (5.46%) were characterized as multidrug-resistant P. aeruginosa (MDRPA). PCR assays were used to detect class 1 integrons. Amplifications of internal variable regions (IVRs) of class 1 integrons revealed three different arrays (0.8, 1.3, and 1.7 kb) with different distributions in clinical isolates. The amplified IVRs were sequenced and three gene cassette arrays including aadB (0.8 kb), aadA6-orfD (1.3 kb), and bla(OXA10)-aacA4 (1.7 kb) were identified. In conclusion, we confirmed the high prevalence of class 1 integons with limited diversity of gene cassette arrays in MDRPA clinical isolates found from five hospitals. This is the first report showing gene cassette contents of class 1 integrons in P. aeruginosa isolates in Iran.
Insights
Multidrug-resistant Pseudomonas aeruginosa (MDRPA) infections are a growing concern. This study identified class 1 integrons in 5.46% of isolates, revealing specific gene cassette arrays responsible for resistance.
Area of Science:
- Microbiology
- Infectious Diseases
- Molecular Biology
Background:
- Pseudomonas aeruginosa is a significant opportunistic pathogen.
- The emergence of multidrug-resistant P. aeruginosa (MDRPA) poses a global health threat.
- Class 1 integrons are key genetic elements mediating antimicrobial resistance acquisition and dissemination.
Purpose of the Study:
- To investigate the prevalence and genetic content of class 1 integrons in clinical MDRPA isolates.
- To characterize the gene cassette arrays within class 1 integrons in P. aeruginosa from Iranian hospitals.
Main Methods:
- Collection of 750 clinical P. aeruginosa isolates from five hospitals (March 2007-May 2009).
- Identification of multidrug-resistant P. aeruginosa (MDRPA) isolates.
- Polymerase chain reaction (PCR) assays to detect class 1 integrons and amplify internal variable regions (IVRs).
- Sequencing of amplified IVRs to identify gene cassette arrays.
Main Results:
- Forty-one isolates (5.46%) were characterized as MDRPA.
- Three distinct class 1 integron gene cassette arrays were identified: aadB (0.8 kb), aadA6-orfD (1.3 kb), and bla(OXA10)-aacA4 (1.7 kb).
- These arrays showed varying distributions among the clinical isolates.
Conclusions:
- Class 1 integrons are prevalent in MDRPA clinical isolates from Iranian hospitals.
- A limited diversity of gene cassette arrays was observed within these class 1 integrons.
- This study provides the first report on the gene cassette content of class 1 integrons in P. aeruginosa isolates in Iran.
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