Related Experiment Video
Updated: Feb 1, 2026

Quantification of Violacein in Chromobacterium violaceum and Its Inhibition by Bioactive Compounds
Published on: August 8, 2025
Topoisomerase II inhibition by the bioactivated benzene metabolite hydroquinone involves multiple mechanisms
Scott Mondrala1, David A Eastmond
1Environmental Toxicology Graduate Program and Department of Cell Biology & Neuroscience, University of California, Riverside, CA 92521, United States.
Abstract:
While benzene is widely recognized as a human and animal carcinogen, the key mechanisms underlying its carcinogenic effects remain unknown. Inhibition of topoisomerase II (topoII) by benzene and its metabolites represents a potential mechanism by which benzene could induce its chromosome-altering and leukemogenic effects. Previous work from our laboratory and others has demonstrated that bioactive benzene metabolites are capable of inhibiting topoII in isolated enzyme and cell culture systems. Similarly, a decrease in topoII activity has been seen in the bone marrow of mice administered benzene in vivo. The objective of these studies was to further investigate the mechanisms by which the bioactivated benzene metabolite, hydroquinone (BAHQ), inhibits topoII in vitro, and to identify the point(s) in the enzyme's catalytic cycle where inhibition occurs. Our experiments indicate that BAHQ inhibits topoII at the DNA binding stage as well as in the closed clamp stage in the catalytic cycle, thereby interfering with either the binding to, or the release of, DNA from the enzyme. While increases in the cleavable complex were also seen with BAHQ treatment, our results suggest that this is related to a shift in equilibrium due to an accumulation of the topoII enzyme at the closed clamp stage rather than a major inhibitory effect on the religation step. An increase in cleavable complex formation as well as the inhibition of enzymatic activity at the closed clamp and other stages of the catalytic cycle in bone marrow cells would likely result in DNA breakage, the formation of chromosomal aberrations, and could potentially result in leukemia-associated chromosomal translocations, similar to those seen in leukemias induced by the bisdioxopiperazine type of catalytic topoII inhibitors.
Insights
Benzene
Area of Science:
- Toxicology
- Molecular Biology
- Biochemistry
Background:
- Benzene is a known carcinogen, but its exact mechanisms of action are unclear.
- Topoisomerase II (topoII) inhibition by benzene metabolites is a suspected cause of DNA damage and leukemia.
- Previous studies show benzene metabolites inhibit topoII in vitro and in vivo.
Purpose of the Study:
- To investigate how benzene metabolite hydroquinone (BAHQ) inhibits topoII.
- To pinpoint the stages in topoII's catalytic cycle affected by BAHQ.
Main Methods:
- In vitro enzyme assays were used to study BAHQ's effect on topoII.
- The catalytic cycle of topoII was analyzed to identify inhibition points.
Main Results:
- BAHQ inhibits topoII at the DNA binding and closed clamp stages.
- BAHQ interferes with DNA binding and release from the enzyme.
- Increased cleavable complexes are likely due to enzyme accumulation at the closed clamp stage, not inhibited religation.
Conclusions:
- BAHQ inhibits topoII by blocking DNA binding and release.
- Inhibition at multiple catalytic stages can lead to DNA breakage and chromosomal aberrations.
- These effects may contribute to benzene-induced leukemia, similar to other topoII inhibitors.
Related Concept Videos
DNA Topoisomerases
Types and Mechanism of action
Topoisomerases are divided into two main types. ...
Benzene to 1,4-Cyclohexadiene: Birch Reduction Mechanism
Feedback Inhibition
Reaction Mechanisms
For instance, the decomposition of ozone appears to follow a mechanism with two steps:
Regulation of Expression Occurs at Multiple Steps
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Structure of Benzene: Molecular Orbital Model

