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Related Concept Videos

Synthetic Biology02:55

Synthetic Biology

Synthetic biology is an interdisciplinary science that involves using principles from disciplines such as engineering, molecular biology, cell biology, and systems biology. It involves remodeling existing organisms from nature or constructing completely new synthetic organisms for applications such as protein or enzyme production, bioremediation, value-added macromolecule production, and the addition of desirable traits to crops, to name a few.
Golden rice
Golden rice is a genetically modified...
Microbial Fermentation01:23

Microbial Fermentation

Fermentation is a crucial anaerobic metabolic process that enables microbes to derive energy from sugar without relying on oxygen or an electron transport chain. This process is fundamental to various biological and industrial applications and is classified based on the metabolic products generated.Role of Pyruvate in FermentationPyruvate and its derivatives serve as key electron acceptors in fermentative pathways. The oxidation of NADH to regenerate NAD+ is essential for the continuation of...
Bioreactor Controls-III01:22

Bioreactor Controls-III

Strain improvement is a foundational strategy in industrial microbiology aimed at maximizing microbial productivity, particularly because natural isolates typically yield commercially valuable products in very low concentrations. Although optimizing the culture medium and environmental conditions can improve yields, these adjustments are inherently limited by the organism’s genetic potential. As a result, the focus shifts toward genetic modifications to enhance biosynthetic capacity. The...
Microbial Fuel Cells01:23

Microbial Fuel Cells

Microbial fuel cells (MFCs) are bioelectrochemical devices that generate electricity by exploiting the metabolic processes of electrogenic bacteria. These systems provide a renewable energy source and serve as an innovative method for treating organic waste, such as wastewater.A typical MFC consists of two chambers: an anoxic (oxygen-free) compartment that houses the bacteria and an oxic (oxygen-rich) compartment that contains oxygen as the terminal electron acceptor. Many MFCs use proton...
Metabolism of Chemolithotrophs01:15

Metabolism of Chemolithotrophs

Chemolithotrophs are microorganisms that obtain energy by oxidizing inorganic molecules such as hydrogen gas (H₂), ammonia (NH₃), reduced sulfur compounds (H₂S, S²⁻), and ferrous iron (Fe²⁺). Unlike heterotrophic organisms that rely on organic carbon, chemolithotrophs transfer electrons from these inorganic donors to the electron transport chain (ETC), generating a proton motive force (PMF) that drives ATP synthesis through oxidative phosphorylation. However, because inorganic electron donors...
Biosynthesis in Bacteria01:24

Biosynthesis in Bacteria

Biosynthesis in bacteria is a fundamental anabolic process that generates essential macromolecules, including proteins, nucleic acids, lipids, and polysaccharides. These macromolecules are critical for cellular growth, replication, and function. The process is tightly regulated and energetically linked to catabolic pathways to ensure optimal resource utilization.Biosynthetic pathways begin with precursor metabolites such as pyruvate, acetyl-CoA, and glucose-6-phosphate derived from glycolysis,...

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Updated: Jun 17, 2026

Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology
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Published on: December 15, 2017

Toward engineering synthetic microbial metabolism.

George H McArthur1, Stephen S Fong

  • 1Department of Chemical and Life Science Engineering, Virginia Commonwealth University, 601 W. Main Street, Richmond, VA 23284-3028, USA.

Journal of Biomedicine & Biotechnology
|December 29, 2009
PubMed
Summary
This summary is machine-generated.

Synthetic biology advances, including DNA synthesis and design tools, enable better microbial metabolic engineering. Further development is needed for predictable, complex synthetic pathway design and microbial metabolism engineering.

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Last Updated: Jun 17, 2026

Generic Protocol for Optimization of Heterologous Protein Production Using Automated Microbioreactor Technology
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Published on: December 15, 2017

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Area of Science:

  • Synthetic biology
  • Microbial metabolic engineering

Background:

  • Well-characterized biological parts and design principles are foundational for advanced microbial metabolic engineering.
  • Improvements in de novo DNA synthesis and codon optimization enhance pathway enzyme function.

Purpose of the Study:

  • To review the current state of synthetic biology in microbial metabolic engineering.
  • To highlight areas for advancement in engineering synthetic microbial metabolism.

Main Methods:

  • Discussing synthetic biology within a four-stage framework: design, modeling, synthesis, and analysis.
  • Reviewing advancements in DNA synthesis, codon optimization, and analytical/computational tools.

Main Results:

  • Current tools facilitate the manufacturing of pathway enzymes with improved or novel functions.
  • Analytical and computer-aided design tools are accelerating the engineering of synthetic pathways.

Conclusions:

  • Further development of analytical and design tools is crucial for predictable engineering of biological systems.
  • Advancements are needed to facilitate true engineering of synthetic microbial metabolism.