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Updated: Jun 17, 2026

Analysis of DNA Double-strand Break (DSB) Repair in Mammalian Cells
Published on: September 8, 2010
Differential antineoplastic effects of butyrate in cells with and without a functioning DNA mismatch repair
Shridhar S Dronamraju1, Jonathan M Coxhead, Seamus B Kelly
1Newcastle University, Framlington Place, Newcastle upon Tyne, United Kingdom.
Abstract:
The aim of this study was to investigate the differential antineoplastic effects of butyrate in cells with and without a functional mismatch repair and to determine the molecular mechanisms underlying these effects. SW48 colon cancer cells in which the MLH1 gene is silenced by promoter hypermethylation and demethylated SW48 cells in which the MLH1 gene is reexpressed were treated with butyrate (0-5mM) for 8 days and the effects on cell number, MLH1 gene promoter methylation, and expression of two cell cycle regulatory genes, CDK4 and GADD45A, were assessed. Butyrate suppressed viable cell number (P < 0.001) and reduced MLH1 promoter methylation (P < 0.05) in SW48 cells. However, in demethylated SW48 cells, butyrate caused an increase in viable cells (P < 0.05) and promoter methylation (P < 0.05). CDK4 expression was downregulated by butyrate exposure, but the effect was significantly greater for demethylated SW48 cells (P = 0.025). Butyrate treatment caused upregulation of GADD45A expression in SW48 cells but downregulation of GADD45A expression in demethylated SW48 cells (P = 0.045). This study supports the hypothesis that butyrate has more potent antineoplastic effects on colon cancer cells with MLH1 dysfunction. Differential expression of key cell cycle regulatory genes may explain some of the molecular mechanisms underlying these effects.
Insights
Butyrate shows stronger anti-cancer effects in colon cancer cells with MLH1 dysfunction. This occurs through differential regulation of cell cycle genes, impacting cell proliferation and gene expression.
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Mismatch repair deficiency is common in colon cancer.
- Butyrate, a short-chain fatty acid, has shown potential anti-cancer properties.
- The role of MLH1 gene status in butyrate's effects is not fully understood.
Purpose of the Study:
- To investigate the differential anti-cancer effects of butyrate on colon cancer cells based on MLH1 gene status.
- To elucidate the molecular mechanisms, including epigenetic modifications and gene expression changes, underlying these differential effects.
Main Methods:
- SW48 colon cancer cells with silenced MLH1 (due to hypermethylation) and demethylated SW48 cells with reexpressed MLH1 were treated with butyrate.
- Assessed effects on viable cell number, MLH1 promoter methylation, and expression of cell cycle genes CDK4 and GADD45A.
Main Results:
- Butyrate suppressed viable cell number and reduced MLH1 promoter methylation in MLH1-silenced cells.
- In contrast, butyrate increased viable cells and MLH1 promoter methylation in MLH1-reexpressed cells.
- Butyrate differentially regulated CDK4 and GADD45A expression, with greater effects observed in MLH1-reexpressed cells.
Conclusions:
- Butyrate exhibits more potent anti-neoplastic effects on colon cancer cells with MLH1 dysfunction.
- Differential expression of cell cycle regulatory genes (CDK4, GADD45A) contributes to the observed effects.
- Epigenetic modulation of the MLH1 gene promoter by butyrate plays a role in its anti-cancer activity.
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