Related Experiment Video
Updated: Jun 17, 2026

10:44
Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline
Published on: December 7, 2021
Goldbeter-Koshland model for open signaling cascades: a mathematical study
Yongfeng Li1, Jeyaraman Srividhya
1IMA, University of Minnesota, 207 Church Street SE, Minneapolis, MN 55455, USA. yonli@ima.umn.edu
Journal of Mathematical Biology
|January 7, 2010
Summary
This study introduces a modified Goldbeter-Koshland model to analyze signaling cascades. It reveals distinct ultrasensitivity regimes and a novel temporal switch behavior in open systems.
Area of Science:
- Biophysics
- Systems Biology
- Biochemical Signaling
Background:
- Cellular signaling pathways are crucial for biological processes.
- Understanding ultrasensitivity and temporal dynamics in signaling is key.
- Existing models may not fully capture open cascade behaviors.
Purpose of the Study:
- To propose and analyze a modified Goldbeter-Koshland model for open signaling cascades.
- To investigate ultrasensitivity regimes within these cascades.
- To identify and characterize novel temporal behaviors.
Main Methods:
- Development of a modified Goldbeter-Koshland (GK) model.
- Mathematical analysis of signaling cascade dynamics.
- Identification of distinct ultrasensitivity regimes.
- Investigation of steady-state and temporal behaviors.
Main Results:
- Three distinct ultrasensitivity regimes were defined.
- A limiting behavior was observed in downstream cycles for long cascades.
- A temporal switch-like behavior was identified in the pre-ultrasensitivity regime.
- This switch-like behavior occurs without feedback circuitry.
Conclusions:
- The modified GK model provides insights into open signaling cascade dynamics.
- Ultrasensitivity plays a critical role in defining cascade regimes.
- A novel, feedback-independent temporal switch behavior exists in these systems.
Related Concept Videos
Intracellular Signaling Cascades
Once a ligand binds to a receptor, the signal is transmitted through the membrane and into the cytoplasm. The continuation of a signal in this manner is called signal transduction. Signal transduction only occurs with cell-surface receptors, which cannot interact with most components of the cell, such as DNA. Only internal receptors can interact directly with DNA in the nucleus to initiate protein synthesis. When a ligand binds to its receptor, conformational changes occur that affect the...
Intracellular Signaling Cascades
Once a ligand binds to a receptor, the signal is transmitted through the membrane and into the cytoplasm. The continuation of a signal in this manner is called signal transduction. Signal transduction only occurs with cell-surface receptors, which cannot interact with most components of the cell, such as DNA. Only internal receptors can interact directly with DNA in the nucleus to initiate protein synthesis. When a ligand binds to its receptor, conformational changes occur that affect the...
SFG Algebra
In Signal Flow Graph (SFG) algebra, the value a node represents is determined by the sum of all signals entering that node. This summed value is then transmitted through every branch leaving the node, making the SFG a powerful tool for visualizing and analyzing control systems.
Each node in an SFG corresponds to a variable, and the interactions between nodes are represented by branches with associated gains. When multiple branches lead into a node, the value at that node is the sum of the...
Each node in an SFG corresponds to a variable, and the interactions between nodes are represented by branches with associated gains. When multiple branches lead into a node, the value at that node is the sum of the...
Amplifying Signals via Enzymatic Cascade
When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze the...
Signal Flow Graphs
Signal-flow graphs offer a streamlined and intuitive approach to representing control systems, providing an alternative to traditional block diagrams. These graphs use branches to symbolize systems and nodes to represent signals, effectively illustrating the relationships and interactions within the system.
In a signal-flow graph, branches denote the system's transfer functions, while nodes represent the signals. The direction of signal flow is indicated by arrows, with the corresponding...
In a signal-flow graph, branches denote the system's transfer functions, while nodes represent the signals. The direction of signal flow is indicated by arrows, with the corresponding...
Cascaded Op Amps
Operational amplifiers (op-amps) are versatile electronic components that can be interconnected in a cascade - one after another in a linear sequence. This cascading is possible due to their infinite input resistance and zero output resistance, allowing them to maintain their input-output relationships even when connected in series.
In a cascaded system, each op-amp is referred to as a stage. The output of one stage drives the input of the subsequent stage. As the input signal passes through...
In a cascaded system, each op-amp is referred to as a stage. The output of one stage drives the input of the subsequent stage. As the input signal passes through...

