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Related Concept Videos

Lysosomal Hydrolases01:22

Lysosomal Hydrolases

Lysosomes are the site for the degradation of macromolecules and biological polymers released during membrane trafficking events such as secretory, endocytic, autophagic, and phagocytic pathways. The membrane-enclosed area of the lysosome, called the lumen, contains hydrolytic enzymes active in an acidic environment. These acid hydrolases are functional at a pH between 4.5 and 5 and are involved in cellular processes such as cell signaling, energy metabolism, restoration of the plasma membrane,...
Protein Modifications in the RER01:26

Protein Modifications in the RER

Modification of secretory and transmembrane proteins entering the rough ER begins in the ER lumen. These modifications aid in protein folding and stabilize the acquired tertiary structure. Protein modifications in the rough ER co-occur at different stages of protein folding.
Broadly, these modifications can be categorized into four main categories — glycosylation, formation of disulfide bonds, assembly of protein subunits, and specific proteolytic cleavages like removal of signal sequences.
Enzymes02:34

Enzymes

Inside living organisms, enzymes act as catalysts for many biochemical reactions involved in cellular metabolism. The role of enzymes is to reduce the activation energies of biochemical reactions by forming complexes with its substrates. The lowering of activation energies favor an increase in the rates of biochemical reactions.
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Ribozymes02:47

Ribozymes

The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
The Proteasome02:18

The Proteasome

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Role of Microtubules in Cell Wall Deposition01:02

Role of Microtubules in Cell Wall Deposition

Microtubules are small hollow tubes in eukaryotic cells. The cell wall microtubules are polymerized dimers of two globular proteins, α-tubulin and β-tubulin, two globular proteins. With a diameter of about 25 nm, microtubules are the widest components of the cytoskeleton. They help the cell resist compression and provide a track along which vesicles move through the cell or pull replicated chromosomes to opposite ends of a dividing cell. Microtubules go through quick cycles of disassembly and...

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Enzymatic Modification and Flow Cytometry Assessment of Yeast Surface Displayed Proteins
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Enzymatic Modification and Flow Cytometry Assessment of Yeast Surface Displayed Proteins

Published on: May 30, 2025

Novel eukaryotic enzymes modifying cell-surface biopolymers.

Vivek Anantharaman1, L Aravind

  • 1National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.

Biology Direct
|January 9, 2010
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Summary
This summary is machine-generated.

Novel enzymes identified modify eukaryotic cell surface glycans, impacting properties like strength and host-pathogen interactions. These findings are crucial for understanding plant and animal biology.

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Area of Science:

  • Biochemistry
  • Molecular Biology
  • Genomics

Background:

  • Eukaryotic extracellular matrices comprise modified proteins, glycans, and biopolymers.
  • Comparative genomics and sequence analysis reveal novel enzymes for cell-surface glycan/glycoprotein modification.

Purpose of the Study:

  • To identify and characterize novel enzymes involved in eukaryotic extracellular matrix modification.
  • To elucidate the functional roles of these enzymes in biological processes.

Main Methods:

  • Comparative genomics and sequence profile analysis.
  • Identification and characterization of enzyme domains (acyltransferase, esterase).
  • Analysis of enzyme conservation patterns.

Main Results:

  • Defined the acyltransferase domain (fungal Cas1p) and unified it with classical 10TM acyltransferases.
  • Identified a novel esterase family (N-terminal domain of Cas1p) with distinct conservation from SGNH/GDSL esterases.
  • Uncovered fused esterase-ligase enzymes in metazoans.

Conclusions:

  • The combined action of acyltransferase and esterase domains regulates glycan acylation, affecting physical properties and host-pathogen interactions.
  • These enzymes are implicated in plant transpiration and stress resistance (e.g., PMR5, ESK1).
  • Metazoan esterases may modify cell surface polymers with amino acids or peptides.