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Sequencing Small Non-coding RNA from Formalin-fixed Tissues and Serum-derived Exosomes from Castration-resistant Prostate Cancer Patients
Published on: November 19, 2019
Nrf2 expression is regulated by epigenetic mechanisms in prostate cancer of TRAMP mice
Siwang Yu1, Tin Oo Khor, Ka-Lung Cheung
1Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Abstract:
Nuclear factor-erythroid 2 p45-related factor 2 (Nrf2) is a transcription factor which regulates the expression of many cytoprotective genes. In the present study, we found that the expression of Nrf2 was suppressed in prostate tumor of the Transgenic Adenocarcinoma of Mouse Prostate (TRAMP) mice. Similarly, the expression of Nrf2 and the induction of NQO1 were also substantially suppressed in tumorigenic TRAMP C1 cells but not in non-tumorigenic TRAMP C3 cells. Examination of the promoter region of the mouse Nrf2 gene identified a CpG island, which was methylated at specific CpG sites in prostate TRAMP tumor and in TRAMP C1 cells but not in normal prostate or TRAMP C3 cells, as shown by bisulfite genomic sequencing. Reporter assays indicated that methylation of these CpG sites dramatically inhibited the transcriptional activity of the Nrf2 promoter. Chromatin immunopreceipitation (ChIP) assays revealed increased binding of the methyl-CpG-binding protein 2 (MBD2) and trimethyl-histone H3 (Lys9) proteins to these CpG sites in the TRAMP C1 cells as compared to TRAMP C3 cells. In contrast, the binding of RNA Pol II and acetylated histone H3 to the Nrf2 promoter was decreased. Furthermore, treatment of TRAMP C1 cells with DNA methyltransferase (DNMT) inhibitor 5-aza-2'-deoxycytidine (5-aza) and histone deacetylase (HDAC) inhibitor trichostatin A (TSA) restored the expression of Nrf2 as well as the induction of NQO1 in TRAMP C1 cells. Taken together, these results indicate that the expression of Nrf2 is suppressed epigenetically by promoter methylation associated with MBD2 and histone modifications in the prostate tumor of TRAMP mice. Our present findings reveal a novel mechanism by which Nrf2 expression is suppressed in TRAMP prostate tumor, shed new light on the role of Nrf2 in carcinogenesis and provide potential new directions for the detection and prevention of prostate cancer.
Insights
Nuclear factor-erythroid 2 p45-related factor 2 (Nrf2) expression is epigenetically suppressed in prostate tumors. Promoter methylation and histone changes inhibit Nrf2, but DNMT and HDAC inhibitors restore its expression, offering new avenues for prostate cancer detection and prevention.
Area of Science:
- Molecular Biology
- Epigenetics
- Cancer Research
Background:
- Nuclear factor-erythroid 2 p45-related factor 2 (Nrf2) is a key transcription factor regulating cytoprotective genes.
- Nrf2 plays a crucial role in cellular defense mechanisms against oxidative stress and carcinogens.
- Dysregulation of Nrf2 has been implicated in various cancers, including prostate cancer.
Purpose of the Study:
- To investigate the mechanism of Nrf2 suppression in prostate tumors using the Transgenic Adenocarcinoma of Mouse Prostate (TRAMP) model.
- To elucidate the role of epigenetic modifications, specifically DNA methylation and histone alterations, in regulating Nrf2 expression in prostate cancer.
- To explore the potential of epigenetic drugs in restoring Nrf2 function in prostate tumor cells.
Main Methods:
- Analysis of Nrf2 and NQO1 expression in normal prostate and TRAMP mouse prostate tumors and cell lines (TRAMP C1 and TRAMP C3).
- Bisulfite genomic sequencing to assess CpG island methylation in the Nrf2 promoter region.
- Reporter assays to evaluate the impact of methylation on Nrf2 promoter activity.
- Chromatin immunoprecipitation (ChIP) assays to detect binding of methyl-CpG-binding protein 2 (MBD2) and histone modifications.
- Treatment of TRAMP C1 cells with DNA methyltransferase (DNMT) inhibitor 5-aza-2'-deoxycytidine (5-aza) and histone deacetylase (HDAC) inhibitor trichostatin A (TSA).
Main Results:
- Nrf2 expression was significantly suppressed in TRAMP mouse prostate tumors and tumorigenic TRAMP C1 cells compared to normal prostate and non-tumorigenic TRAMP C3 cells.
- CpG island methylation in the Nrf2 promoter was observed in TRAMP tumors and TRAMP C1 cells, correlating with reduced Nrf2 transcriptional activity.
- Increased binding of MBD2 and trimethyl-histone H3 (Lys9) and decreased binding of RNA Pol II and acetylated histone H3 were found at the Nrf2 promoter in TRAMP C1 cells.
- Treatment with 5-aza and TSA restored Nrf2 expression and NQO1 induction in TRAMP C1 cells.
Conclusions:
- Epigenetic silencing, specifically promoter methylation associated with MBD2 and repressive histone modifications, underlies Nrf2 suppression in TRAMP mouse prostate tumors.
- These findings reveal a novel epigenetic mechanism contributing to Nrf2 downregulation in prostate carcinogenesis.
- The study suggests that targeting epigenetic pathways may offer a promising strategy for prostate cancer prevention and treatment by restoring Nrf2 function.
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