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The DNA unwinding element binding protein DUE-B interacts with Cdc45 in preinitiation complex formation
1Department of Biochemistry and Molecular Biology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio 45435, USA.
Abstract:
Template unwinding during DNA replication initiation requires the loading of the MCM helicase activator Cdc45 at replication origins. We show that Cdc45 interacts with the DNA unwinding element (DUE) binding protein DUE-B and that these proteins localize to the DUEs of active replication origins. DUE-B and Cdc45 are not bound at the inactive c-myc replicator in the absence of a functional DUE or at the recently identified ataxin 10 (ATX10) origin, which is silent before disease-related (ATTCT)(n) repeat length expansion of its DUE sequence, despite the presence of the origin recognition complex (ORC) and MCM proteins at these origins. Addition of a heterologous DUE to the ectopic c-myc origin, or expansion of the ATX10 DUE, leads to origin activation, DUE-B binding, and Cdc45 binding. DUE-B, Cdc45, and topoisomerase IIbeta binding protein 1 (TopBP1) form complexes in cell extracts and when expressed from baculovirus vectors. During replication in Xenopus egg extracts, DUE-B and Cdc45 bind to chromatin with similar kinetics, and DUE-B immunodepletion blocks replication and the loading of Cdc45 and a fraction of TopBP1. The coordinated binding of DUE-B and Cdc45 to origins and the physical interactions of DUE-B, Cdc45, and TopBP1 suggest that complexes of these proteins are necessary for replication initiation.
Insights
DNA replication initiation requires Cdc45 loading. This study reveals that DNA unwinding element-binding protein B (DUE-B) and Cdc45 interact and bind to active replication origins, facilitating initiation.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- DNA replication initiation is a complex process requiring precise regulation.
- The MCM helicase activator Cdc45 is crucial for loading at replication origins.
- The DNA unwinding element (DUE) plays a critical role in origin activation.
Purpose of the Study:
- To investigate the interaction between Cdc45 and DUE-binding proteins.
- To determine the role of DUE-B in replication origin activation and Cdc45 loading.
- To elucidate the mechanism of replication initiation at specific origins.
Main Methods:
- Co-immunoprecipitation to study protein interactions.
- Chromatin immunoprecipitation to assess protein localization.
- Xenopus egg extract replication assays.
- Analysis of replication origins with varying DUE sequences.
Main Results:
- Cdc45 interacts with the DUE-binding protein DUE-B.
- Both proteins localize to DUEs of active replication origins.
- Functional DUEs are essential for DUE-B and Cdc45 binding and origin activation.
- DUE-B, Cdc45, and TopBP1 form complexes, and DUE-B is required for Cdc45 and TopBP1 loading during replication.
Conclusions:
- DUE-B and Cdc45 binding to origins is coordinated and essential for replication initiation.
- Complex formation between DUE-B, Cdc45, and TopBP1 is critical for the initiation of DNA replication.
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