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Updated: Jun 17, 2026

Isolation of Intermediate Filament Proteins from Multiple Mouse Tissues to Study Aging-associated Post-translational Modifications
Published on: May 18, 2017
Compromise in mRNA processing machinery in senescent human fibroblasts: implications for a novel potential role of
Panagiotis Chandris1, Christina C Giannouli, George Panayotou
1Institute of Molecular Oncology, Vari, Attiki, Greece. handris@fleming.gr
Abstract:
Ataxia-Telangiectasia and Rad3 related kinase (ATR) is a major gatekeeper of genomic stability and has been the subject of exhaustive study in the context of cell cycle progression and senescence as a DNA damage-induced response. Conditional knockout of the kinase in adult mice results in accelerated aging phenomena, such as such hair graying, alopecia, kyphosis, osteoporosis, thymic involution, fibrosis, and other abnormalities. In addition to that, recent reports strongly implicate signaling mediated by this kinase in the regulation of alternative splicing of certain, mostly cancer-associated transcripts. Interest to the function of mRNA synthesis and processing is constantly increasing as severe degenerative diseases, such as cancer, cystic fibrosis and Hutchinson-Gilford progeria syndrome are at least partly attributed to these abnormalities. In light of the above, we investigate the RNA processing machinery in senescent fibroblasts as opposed to young, either exponentially proliferating or quiescent, further focusing on the distribution and localization of active, phosphorylated ATR at ser428. This study implicates the spatiotemporal presence of the phosphorylated kinase in the regulation of mRNA splicing and polyadenylation. This function appears perturbed in senescent cells, accompanied by a distinct pattern of phospho-ATR in the senescent nucleus.
Insights
Ataxia-Telangiectasia and Rad3 related kinase (ATR) plays a key role in genomic stability and DNA damage response. This study reveals ATR
Area of Science:
- Cellular Biology
- Genomics
- Molecular Biology
Background:
- Ataxia-Telangiectasia and Rad3 related kinase (ATR) is crucial for genomic stability and DNA damage responses.
- ATR signaling is implicated in regulating alternative splicing of cancer-associated transcripts.
- Dysregulation of mRNA synthesis and processing is linked to degenerative diseases like cancer and progeria.
Purpose of the Study:
- To investigate the role of ATR in RNA processing machinery within senescent fibroblasts.
- To examine the distribution and localization of active, phosphorylated ATR (pATR) at ser428 in senescent cells.
- To understand how ATR spatiotemporal presence influences mRNA splicing and polyadenylation.
Main Methods:
- Comparative analysis of RNA processing in senescent versus young (proliferating or quiescent) fibroblasts.
- Immunofluorescence to detect the localization of phosphorylated ATR (pATR) at ser428.
- Assessment of mRNA splicing and polyadenylation patterns in senescent cells.
Main Results:
- Senescent fibroblasts exhibit altered RNA processing machinery compared to young cells.
- Distinct patterns of pATR localization were observed in the senescent nucleus.
- The spatiotemporal presence of pATR is implicated in regulating mRNA splicing and polyadenylation.
Conclusions:
- ATR plays a significant role in regulating mRNA splicing and polyadenylation.
- This ATR-mediated function is perturbed in senescent cells.
- Altered pATR distribution in senescent nuclei suggests a role in cellular aging and disease pathogenesis.
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