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Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
Published on: September 20, 2018
Involvement of histone deacetylation in MORC2-mediated down-regulation of carbonic anhydrase IX
Yangguang Shao1, Yan Li, Jian Zhang
1Department of Cell Biology, Key Laboratory of Cell Biology, Ministry of Public Health, and Key Laboratory of Medical Cell Biology, Ministry of Education, China Medical University, Shenyang 110001, China.
Abstract:
Carbonic anhydrase IX (CAIX) plays an important role in the growth and survival of tumor cells. MORC2 is a member of the MORC protein family. The MORC proteins contain a CW-type zinc finger domain and are predicted to have the function of regulating transcription, but no MORC2 target genes have been identified. Here we performed a DNA microarray hybridization and found CAIX mRNA to be down-regulated 8-fold when MORC2 was overexpressed. This result was further confirmed by northern and western blot analysis. Our results also showed that the protected region 4 (PR4) was important for the repression function of MORC2. Moreover, MORC2 decreased the acetylation level of histone H3 at the CAIX promoter. Meanwhile, trichostatin A (TSA) had an increasing effect on CAIX promoter activity. Among the six HDACs tested, histone deacetylase 4 (HDAC4) had a much more prominent effect on CAIX repression. ChIP and ChIP Re-IP assays showed that MORC2 and HDAC4 were assembled on the same region of the CAIX promoter. Importantly, we further confirmed that both proteins are simultaneously present in the PR4-binding complex. These results may contribute to understanding the molecular mechanisms of CAIX regulation.
Insights
MORC2 overexpression significantly down-regulates carbonic anhydrase IX (CAIX) in tumor cells. This involves MORC2 and HDAC4 binding to the CAIX promoter, impacting tumor growth regulation.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Carbonic anhydrase IX (CAIX) is crucial for tumor cell growth and survival.
- MORC2, a member of the MORC protein family, is implicated in transcriptional regulation, but its targets are unknown.
Purpose of the Study:
- To investigate the role of MORC2 in regulating CAIX expression.
- To elucidate the molecular mechanisms underlying MORC2-mediated CAIX regulation.
Main Methods:
- DNA microarray hybridization to identify MORC2 target genes.
- Northern and western blot analysis to confirm gene expression changes.
- Chromatin immunoprecipitation (ChIP) assays to assess protein-DNA interactions and histone modifications.
Main Results:
- Overexpression of MORC2 led to an 8-fold down-regulation of CAIX mRNA.
- MORC2-mediated repression of CAIX involves histone H3 deacetylation at the CAIX promoter.
- Histone deacetylase 4 (HDAC4) was identified as a key mediator, forming a complex with MORC2 on the CAIX promoter's protected region 4 (PR4).
Conclusions:
- MORC2 functions as a transcriptional repressor of CAIX.
- The MORC2-HDAC4 complex plays a critical role in epigenetic regulation of CAIX.
- These findings provide insights into the molecular mechanisms governing CAIX expression in cancer.
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