Related Experiment Video

Updated: Jun 16, 2026

New Features in Visual Dynamics 3.0
05:00

New Features in Visual Dynamics 3.0

Published on: August 9, 2024

Gromita: a fully integrated graphical user interface to gromacs 4

Diamantis Sellis1, Dimitrios Vlachakis, Metaxia Vlassi

  • 1Institute of Biology, National Centre for Scientific Research "Demokritos", 15310 Ag. Paraskevi Attikis, Greece.

Bioinformatics and Biology Insights
|February 9, 2010
PubMed

Keywords:
cross-platformgraphical user interfacegromacsmolecular dynamicssimulation

More Related Videos

gP2S, an Information Management System for CryoEM Experiments13:01

gP2S, an Information Management System for CryoEM Experiments

Published on: June 10, 2021

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies07:31

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies

Published on: September 1, 2023

Related Concept Videos

Molecular Models02:00

Molecular Models

Physical models representing molecular architectures of chemical compounds play essential roles in understanding chemistry. The use of molecular models makes it easier to visualize the structures and shapes of atoms and molecules.
Protein-Protein Interfaces02:04

Protein-Protein Interfaces

Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...
Protein-protein Interfaces02:04

Protein-protein Interfaces

Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...
Interfacial Electrochemical Methods: Overview01:06

Interfacial Electrochemical Methods: Overview

Interfacial electrochemical methods focus on the phenomena occurring at the boundary between an electrode and a solution, as opposed to bulk methods that concentrate on the solution's overall properties. These interfacial methods are classified as either static or dynamic based on the presence of a nonzero current in the electrochemical cell and the consistency of analyte concentrations. Static methods, such as potentiometry, measure the cell's potential without any significant current passing...
Introduction to MATLAB01:24

Introduction to MATLAB

MATLAB stands for Matrix Laboratory. MathWorks developed MATLAB as a multi-paradigm numerical computing environment and proprietary programming language. It has evolved significantly over the years to become a tool utilized by engineers, scientists, and mathematicians for various tasks, including matrix calculations, developing algorithms, data analysis, and visualization. MATLAB's applications span various industries and disciplines. It's used in image and signal processing, communications,...
Molecular Comparison of Gases, Liquids, and Solids02:26

Molecular Comparison of Gases, Liquids, and Solids

Particles in a solid are tightly packed together (fixed shape) and often arranged in a regular pattern; in a liquid, they are close together with no regular arrangement (no fixed shape); in a gas, they are far apart with no regular arrangement (no fixed shape). Particles in a solid vibrate about fixed positions (cannot flow) and do not generally move in relation to one another; in a liquid, they move past each other (can flow) but remain in essentially constant contact; in a gas, they move...