Related Experiment Video
Updated: Jun 16, 2026

2 in 1: One-step Affinity Purification for the Parallel Analysis of Protein-Protein and Protein-Metabolite Complexes
Published on: August 6, 2018
The catalytic and protein-protein interaction domains are required for APM1 function
Fazeeda N Hosein1, Anindita Bandyopadhyay, Wendy Ann Peer
1Department of Horticulture, Purdue University, West Lafayette, Indiana 47907, USA.
Aminopeptidase M1 (APM1) is crucial for plant development. Both its catalytic and protein interaction domains are essential, but they can function independently and do not need to be on the same molecule for dimerization.
Area of Science:
- Biochemistry
- Molecular Biology
- Plant Science
Background:
- Aminopeptidase M1 (APM1) is vital for Arabidopsis thaliana development.
- Mammalian M1 proteases possess distinct enzymatic and protein-protein interaction domains.
Purpose of the Study:
- To investigate the distinct roles of APM1's enzymatic and interaction domains.
- To determine if these domains can function independently in Arabidopsis.
Main Methods:
- Utilized ezetimibe and PAQ-22 inhibitors to probe APM1 functions.
- Generated and analyzed apm1 knockdown and mutant lines.
- Performed complementation studies using human aminopeptidases and other Arabidopsis M1 family members.
Main Results:
- Ezetimibe (inhibitor of protein-protein interactions) and PAQ-22 (inhibitor of catalytic activity) produced distinct phenotypes.
- Catalytically inactive APM1 failed to rescue apm1-1 knockdown mutants.
- APM1 mutants lacking the C-terminus were rescued by catalytically inactive APM1, suggesting interaction domain importance.
- Overexpression of human insulin-responsive aminopeptidase/oxytocinase rescued all apm1 phenotypes, while its catalytically inactive form only rescued the C-terminus mutant.
- APM1 C-terminus is crucial for protein interactions and enzymatic activity facilitation.
Conclusions:
- APM1 requires both catalytic and interaction domains for full function.
- These domains can operate independently and are not required on the same molecular chain for dimerization.
- The C-terminus is critical for APM1's interaction-dependent functions.
Related Concept Videos
Assembly of Signaling Complexes
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Allosteric Proteins-ATCase
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
The ADP/ATP Carrier Protein
Conservation of Protein Domains Over Different Proteins
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to form...
Coat Assembly and GTPases
Coat assembly depends on the local availability of phosphatidylinositol phosphates or PIPs and GTP-binding proteins. Adaptor proteins, which link the coat proteins to the membrane, bind to these PIPs and play a crucial role in controlling...
Anaphase Promoting Complex

