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Breeding by Design for Functional Rice with Genome Editing Technologies
Published on: January 3, 2025
Genomic selection in plant breeding: from theory to practice
Jean-Luc Jannink1, Aaron J Lorenz, Hiroyoshi Iwata
1USDA-ARS, R.W. Holley Center for Agriculture and Health, Department of Plant Breeding and Genetics, Cornell University, Ithaca, New York 14853, USA. jeanluc.jannink@ars.usda.gov
Genomic selection (GS) offers a powerful approach to improve complex crop traits like yield and stress tolerance. By utilizing all DNA marker data, GS provides more accurate predictions for faster, cost-effective crop breeding.
Area of Science:
- Plant breeding
- Genetics
- Agricultural science
Background:
- Complex crop traits (yield, quality, stress tolerance) are controlled by numerous genes with small effects, challenging traditional breeding methods.
- The decreasing cost of DNA marker information necessitates advanced selection strategies.
- Traditional marker-assisted selection (MAS) has limitations for polygenic traits.
Purpose of the Study:
- To review the fundamental principles of genomic selection (GS).
- To summarize key findings from recent theoretical, simulation, and empirical studies on GS.
- To identify future research needs and implications of GS for long-term crop improvement.
Main Methods:
- Genomic selection (GS) utilizes genome-wide marker data to predict breeding values.
- GS employs all marker data as predictors, moving beyond identifying individual significant loci.
- Review of existing literature encompassing theoretical, simulation, and empirical research on GS.
Main Results:
- Genomic selection (GS) enhances prediction accuracy for complex polygenic traits compared to traditional MAS.
- GS enables more rapid and cost-effective genetic gains in crop breeding programs.
- Empirical studies demonstrate the practical utility of GS in accelerating the development of improved crop varieties.
Conclusions:
- Genomic selection (GS) represents a paradigm shift in plant breeding for complex traits.
- Further research is needed to address methodological questions and optimize GS for long-term breeding strategies.
- GS is crucial for accelerating the delivery of crops with enhanced yield, quality, and resilience.
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