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Related Concept Videos

Mismatch Repair01:20

Mismatch Repair

Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Mismatch Repair01:36

Mismatch Repair

Overview
Mismatch Repair01:36

Mismatch Repair

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Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Long-patch Base Excision Repair01:02

Long-patch Base Excision Repair

Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:

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Related Experiment Video

Updated: Jun 16, 2026

Application of Stopped-flow Kinetics Methods to Investigate the Mechanism of Action of a DNA Repair Protein
11:01

Application of Stopped-flow Kinetics Methods to Investigate the Mechanism of Action of a DNA Repair Protein

Published on: March 31, 2010

MutSbeta exceeds MutSalpha in dinucleotide loop repair.

J Kantelinen1, M Kansikas, M K Korhonen

  • 1Department of Biological and Environmental Sciences, University of Helsinki, Viikinkaari 5, Helsinki, Finland.

British Journal of Cancer
|February 18, 2010
PubMed
Summary

MutSalpha and MutSbeta exhibit functional redundancy in DNA repair, particularly for insertion/deletion loops. MutSbeta plays a key role in repairing specific DNA repeats, offering clinical insights into MSH3 deficiency in tumors.

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Related Experiment Videos

Last Updated: Jun 16, 2026

Application of Stopped-flow Kinetics Methods to Investigate the Mechanism of Action of a DNA Repair Protein
11:01

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Published on: March 31, 2010

Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis
11:08

Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis

Published on: June 19, 2018

The Lambda Select cII Mutation Detection System
07:08

The Lambda Select cII Mutation Detection System

Published on: April 26, 2018

Area of Science:

  • Molecular Biology
  • Genetics
  • Cancer Research

Background:

  • MutSalpha (MSH2+MSH6) and MutSbeta (MSH2+MSH3) are key DNA mismatch repair factors.
  • Their functional redundancy and clinical significance in mismatch repair (MMR)-deficient tumors remain incompletely understood.
  • Tumor microsatellite instability (MSI) type correlates with the affected MMR gene and its substrate specificities.

Purpose of the Study:

  • To investigate the substrate specificities and functional redundancy of MutSalpha and MutSbeta in vitro.
  • To clarify the roles of these factors in repairing different types of DNA mismatches and insertion/deletion loops (IDLs).

Main Methods:

  • In vitro mismatch repair (MMR) assay.
  • Utilized three substrate constructs: GT mismatch, 1-nucleotide IDLs, and 2-nucleotide IDLs.
  • Assays were performed in three different cell lines.

Main Results:

  • MutSalpha demonstrated primary responsibility for GT mismatch and 1-nucleotide IDL repair.
  • Both MutSalpha and MutSbeta showed functional redundancy in repairing 2-nucleotide IDLs.
  • MutSbeta appeared to have a more significant role than MutSalpha in 2-nucleotide IDL repair, contrary to previous findings.

Conclusions:

  • MutSbeta's significant role in 2-nucleotide IDL repair has clinical relevance.
  • This suggests that MSH3 deficiency in tumors may present with low dinucleotide and absent mononucleotide repeat instability.