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Updated: Jun 16, 2026

A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
MicroRNA-27b contributes to lipopolysaccharide-mediated peroxisome proliferator-activated receptor gamma (PPARgamma)
Carla Jennewein1, Andreas von Knethen, Tobias Schmid
1Institute of Biochemistry I/ZAFES, Faculty of Medicine, Goethe-University Frankfurt, Germany.
Abstract:
Peroxisome proliferator-activated receptor gamma (PPARgamma) gained considerable interest as a therapeutic target during chronic inflammatory diseases. Remarkably, the pathogenesis of diseases such as multiple sclerosis or Alzheimer is associated with impaired PPARgamma expression. Considering that regulation of PPARgamma expression during inflammation is largely unknown, we were interested in elucidating underlying mechanisms. To this end, we initiated an inflammatory response by exposing primary human macrophages to lipopolysaccharide (LPS) and observed a rapid decline of PPARgamma1 expression. Because promoter activities were not affected by LPS, we focused on mRNA stability and noticed a decreased mRNA half-life. As RNA stability is often regulated via 3'-untranslated regions (UTRs), we analyzed the impact of the PPARgamma-3'-UTR by reporter assays using specific constructs. LPS significantly reduced luciferase activity of the pGL3-PPARgamma-3'-UTR, suggesting that PPARgamma1 mRNA is destabilized. Deletion or mutation of a potential microRNA-27a/b (miR-27a/b) binding site within the 3'-UTR restored luciferase activity. Moreover, inhibition of miR-27b, which was induced upon LPS exposure, partially reversed PPARgamma1 mRNA decay, whereas miR-27b overexpression decreased PPARgamma1 mRNA content. In addition, LPS further reduced this decay. The functional relevance of miR-27b-dependent PPARgamma1 decrease was proven by inhibition or overexpression of miR-27b, which affected LPS-induced expression of the pro-inflammatory cytokines tumor necrosis factor alpha (TNFalpha) and interleukin (IL)-6. We provide evidence that LPS-induced miR-27b contributes to destabilization of PPARgamma1 mRNA. Understanding molecular mechanisms decreasing PPARgamma might help to better appreciate inflammatory diseases.
Insights
Lipopolysaccharide (LPS) decreases peroxisome proliferator-activated receptor gamma (PPARgamma) expression in macrophages by reducing mRNA stability. This involves microRNA-27b (miR-27b) targeting the PPARgamma 3'-UTR, impacting inflammatory cytokine production.
Area of Science:
- Molecular Biology
- Immunology
- Cell Biology
Background:
- Peroxisome proliferator-activated receptor gamma (PPARgamma) is a therapeutic target for chronic inflammatory diseases.
- Impaired PPARgamma expression is linked to neurodegenerative conditions like multiple sclerosis and Alzheimer's disease.
- Mechanisms regulating PPARgamma expression during inflammation are largely unknown.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying PPARgamma expression regulation during inflammation.
- To investigate the role of mRNA stability and microRNAs in PPARgamma regulation.
Main Methods:
- Primary human macrophages were stimulated with lipopolysaccharide (LPS) to induce inflammation.
- Reporter assays were used to assess the impact of the PPARgamma 3 -untranslated region (3 -UTR) on gene expression.
- MicroRNA (miR-27a/b) binding sites within the 3 -UTR were analyzed.
- Inhibition and overexpression of miR-27b were performed to study its effect on PPARgamma mRNA stability and inflammatory cytokine production.
Main Results:
- LPS exposure led to a rapid decrease in PPARgamma1 expression.
- PPARgamma1 mRNA half-life was significantly reduced upon LPS stimulation.
- A specific binding site for miR-27a/b in the PPARgamma 3 -UTR was identified as crucial for mRNA destabilization.
- LPS-induced miR-27b was shown to directly target PPARgamma1 mRNA, leading to its decay.
- Modulation of miR-27b levels affected the expression of pro-inflammatory cytokines, including TNFalpha and IL-6.
Conclusions:
- LPS-induced miR-27b contributes to the destabilization of PPARgamma1 mRNA in macrophages.
- This miR-27b-mediated downregulation of PPARgamma1 plays a role in regulating the inflammatory response.
- Understanding these mechanisms could offer new therapeutic strategies for inflammatory diseases.
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