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Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
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Published on: June 17, 2012

Community annotation in biology.

Raja Mazumder1, Darren A Natale, Jessica Anne Ecalnir Julio

  • 1Department of Biochemistry and Molecular & Cellular Biology, Georgetown University Medical Center, Washington, DC 20007, USA. rm285@georgetown.edu

Biology Direct
|February 20, 2010
PubMed
Summary
This summary is machine-generated.

Engaging scientists for biological database annotation requires proactive outreach and user-friendly interfaces. Direct solicitation and simplified contribution processes are key, outweighing recognition or rewards.

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Area of Science:

  • Bioinformatics
  • Genomics
  • Proteomics

Background:

  • Scientific community engagement in annotating biological data, such as protein/gene function, has been limited.
  • Previous hypotheses for low participation remain unverified.

Purpose of the Study:

  • To investigate factors motivating biologists to contribute to biological databases.
  • To identify strategies for improving community annotation efforts.

Main Methods:

  • Surveyed 50 biologists with recent publications on gene or protein characterization.
  • Analyzed responses to understand motivators for database contributions.

Main Results:

  • Proactive solicitation of contributions by database managers is crucial.
  • Easy-to-use interfaces and clear annotation instructions are essential for contributors.
  • Factors like 'reward' and 'employer/funding agency recognition' were less influential than anticipated.

Conclusions:

  • Community annotation projects should prioritize direct outreach to biologists.
  • Resources should be allocated to streamline the input and annotation processes.
  • Improving user experience and direct engagement are vital for successful biological data annotation.