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Structure elucidation at the nanomole scale. 3. Phorbasides G-I from Phorbas sp
Doralyn S Dalisay1, Tadeusz F Molinski
1Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive MC0358, La Jolla, California 92093-0358, USA.
Journal of Natural Products
|February 27, 2010
Summary
Three new chlorocyclopropyl ene-yne macrolide glycosides, named phorbasides G-I, were isolated from the sponge Phorbas sp. Their structures were determined using mass spectrometry, circular dichroism, and microcryoprobe NMR, with sugar residues differentiating the compounds.
Area of Science:
- Marine Natural Products Chemistry
- Organic Chemistry
- Biotechnology
Background:
- Marine sponges are a rich source of structurally diverse bioactive compounds.
- Phorbasides A and B are known macrolide glycosides with potential biological activities.
- The Phorbas genus continues to yield novel chemical entities.
Purpose of the Study:
- To isolate and characterize new macrolide glycosides from the marine sponge Phorbas sp.
- To elucidate the structures and absolute configurations of the novel compounds.
- To expand the known chemical diversity of chlorocyclopropyl ene-yne macrolides.
Main Methods:
- Isolation of compounds using chromatographic techniques.
- Structure elucidation via mass spectrometry (MS), circular dichroism (CD), and microcryoprobe Nuclear Magnetic Resonance (NMR) spectroscopy.
- Determination of absolute configurations through Rotating-frame Overhauser Effect SpectroscopY (ROESY) and CD correlation with known compounds.
Main Results:
- Three new phorbasides, designated G-I, were successfully isolated from Phorbas sp.
- The new compounds are chlorocyclopropyl ene-yne macrolide glycosides, differing only in their sugar moieties.
- Yields of 7-9.5 µg were obtained for the new phorbasides.
- Complete structural characterization and absolute configuration determination were achieved.
Conclusions:
- The study successfully identified and characterized three novel phorbasides (G-I) from Phorbas sp.
- The structural variations primarily lie in the glycosidic components, highlighting the chemo-diversity within this compound class.
- The findings contribute to the understanding of marine natural products and provide new leads for drug discovery.

