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Termination of Translation

Termination of Translation

The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...

Termination of Translation

Termination of Translation

The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...

Post-translational Translocation of Proteins to the RER

Post-translational Translocation of Proteins to the RER

A sizable fraction of proteins destined for ER are first synthesized in the cell cytosol and then transported across the ER membrane–a process called post-translational translocation. Similar to cotranslationally translocated proteins, these proteins also use the Sec translocon complex to enter the ER lumen.
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...

Cotranslational Protein Translocation

Cotranslational Protein Translocation

Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...

Translation in Prokaryotes

Translation in Prokaryotes

Prokaryote translation is a complex, highly coordinated process that converts genetic information from mRNA into functional proteins. It involves three stages: initiation, elongation, and termination, each facilitated by specific molecular components.Initiation of TranslationThe process begins with the assembly of the ribosomal subunits and initiation factors on the mRNA. In bacteria, the 30S ribosomal subunit recognizes the Shine-Dalgarno sequence in the mRNA, a conserved region upstream of...

Directing Proteins to the Rough Endoplasmic Reticulum

Directing Proteins to the Rough Endoplasmic Reticulum

The organelle-specific signaling sequences direct proteins synthesized in the cytosol to their final destination like ER, mitochondria, peroxisomes, etc. Some of the proteins directed to ER are then trafficked via vesicles to other organelles within the cell or the extracellular environment through the Golgi complex. For example, the rough ER synthesizes soluble proteins for transportation to the lysosomes or secretion out of the cell. It can also synthesize transmembrane proteins that can...

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Related Experiment Video

Updated: Jun 15, 2026

Single Molecule Fluorescence Energy Transfer Study of Ribosome Protein Synthesis

Single Molecule Fluorescence Energy Transfer Study of Ribosome Protein Synthesis

Published on: July 6, 2021

Ribosome structure and dynamics during translocation and termination.

Jack A Dunkle¹, Jamie H D Cate

¹Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.

Annual Review of Biophysics

|March 3, 2010

Summary

Recent structural studies reveal bacterial ribosome mechanisms for protein synthesis, focusing on mRNA and tRNA movement during translocation and error handling in translation termination.

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Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses

Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses

Published on: February 25, 2011

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Last Updated: Jun 15, 2026

Single Molecule Fluorescence Energy Transfer Study of Ribosome Protein Synthesis

Single Molecule Fluorescence Energy Transfer Study of Ribosome Protein Synthesis

Published on: July 6, 2021

Dual DNA Rulers to Study the Mechanism of Ribosome Translocation with Single-Nucleotide Resolution

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Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses

Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses

Published on: February 25, 2011

Area of Science:

Molecular Biology
Structural Biology
Biochemistry

Background:

Protein biosynthesis (translation) occurs on ribosomes, conserved RNA-protein machines essential for life.
Recent structural biology advances provide molecular insights into ribosome function.
Bacterial ribosomes are key targets for understanding fundamental translation processes.

Purpose of the Study:

To review recent structural models of the bacterial ribosome.
To elucidate the molecular mechanisms of translation, including translocation and termination.
To discuss bacterial strategies for managing errors in translation.

Main Methods:

Cryo-electron microscopy (cryo-EM) for high-resolution structural analysis.
X-ray crystallography for detailed atomic-level structural determination.
Integration of structural data with mechanistic insights into translation.

Main Results:

Detailed structural models illuminate messenger RNA (mRNA) and transfer RNA (tRNA) movement during translocation.
Structures reveal the molecular basis for accurate stop codon recognition in translation termination.
Insights into bacterial mechanisms for correcting translocation and termination errors.

Conclusions:

Structural biology provides unprecedented understanding of bacterial ribosome function.
Mechanisms of translocation and termination are detailed at the molecular level.
Bacterial error-handling pathways ensure translational fidelity.