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Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
Next-generation Sequencing03:00

Next-generation Sequencing

The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features.

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Related Experiment Video

Updated: Jun 15, 2026

An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

Using the NCBI map viewer to browse genomic sequence data.

Tyra G Wolfsberg1

  • 1Bethesda, Maryland.

Current Protocols in Bioinformatics
|March 6, 2010
PubMed
Summary
This summary is machine-generated.

This guide introduces the NCBI Map Viewer for exploring genome annotations and navigating genomic data. It details text searches, BLAST analysis, and retrieving gene families for comprehensive genome exploration.

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Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

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Last Updated: Jun 15, 2026

An Integrated Approach for Microprotein Identification and Sequence Analysis
09:37

An Integrated Approach for Microprotein Identification and Sequence Analysis

Published on: July 12, 2022

Pattern-based Search of Epigenomic Data Using GeNemo
06:38

Pattern-based Search of Epigenomic Data Using GeNemo

Published on: October 8, 2017

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
09:37

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

Published on: August 15, 2019

Area of Science:

  • Genomics
  • Bioinformatics

Background:

  • Genome annotation provides essential information about the structure and function of genes.
  • Navigating and querying large-scale genomic datasets is crucial for biological research.

Purpose of the Study:

  • To provide a comprehensive guide to using the NCBI Map Viewer for genome exploration.
  • To demonstrate various methods for querying and analyzing genomic sequences and annotations.

Main Methods:

  • Utilizing the NCBI Map Viewer for text-based searches of genome annotations.
  • Performing navigation, zooming, and map display adjustments within the Map Viewer.
  • Employing BLAST searches for sequence similarity analysis against the human genome.
  • Retrieving gene lists between specific genomic markers (STS markers).
  • Identifying annotated gene family members within the genome.

Main Results:

  • Users can effectively view the genomic context of genes and navigate along chromosomes.
  • The Map Viewer facilitates hiding and showing specific genomic information layers.
  • BLAST searches provide insights into sequence homology and evolutionary relationships.
  • Specific gene sets and gene families can be systematically identified and retrieved.

Conclusions:

  • The NCBI Map Viewer is a versatile tool for exploring and analyzing genomic data.
  • The described protocols enable efficient querying and retrieval of diverse genomic information.
  • This unit empowers researchers to conduct in-depth genomic studies using NCBI resources.