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Related Concept Videos

Conserved Binding Sites01:49

Conserved Binding Sites

Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
DNA Helicases00:55

DNA Helicases

DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...

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Related Experiment Video

Updated: Jun 15, 2026

Analyzing and Building Nucleic Acid Structures with 3DNA
16:24

Analyzing and Building Nucleic Acid Structures with 3DNA

Published on: April 26, 2013

Z-DNA binding proteins as targets for structure-based virtual screening.

Doyoun Kim1, Young-Ho Lee, Hye-Yeon Hwang

  • 1Department of Molecular Cell Biology, Samsung Biomedical Research Institute, Sungkyunkwan University School of Medicine, Suwon 440-746, South Korea.

Current Drug Targets
|March 10, 2010
PubMed
Summary

Z-DNA binding proteins (ZBPs) are crucial for innate immunity and are targeted by viruses. This study reviews ZBPs as drug targets and recent progress in identifying ZBP inhibitors for infectious and immune diseases.

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Last Updated: Jun 15, 2026

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08:04

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Published on: February 10, 2022

Area of Science:

  • Molecular Biology
  • Immunology
  • Drug Discovery

Background:

  • Z-DNA is an alternative DNA structure involved in nucleotide metabolism.
  • Vertebrate Z-DNA binding proteins (ZBPs), such as ADAR1, DAI, and PKZ, regulate innate immunity, particularly interferon-induced responses.
  • Viral proteins, like vaccinia virus E3L, can interfere with host ZBPs to suppress immune responses.

Purpose of the Study:

  • To provide an overview of Z-DNA and ZBPs as potential therapeutic targets.
  • To summarize recent advancements in the structure-based discovery of ZBP inhibitors.

Main Methods:

  • Review of existing literature on Z-DNA, ZBPs, and their roles in immunity.
  • Analysis of recent progress in computer-aided drug development for ZBP inhibitors.
  • Examination of high-resolution structural data (crystal and NMR) of ZBPs.

Main Results:

  • ZBPs are critical regulators of innate immunity and are targeted by viral pathogens.
  • The structural information of ZBPs facilitates the discovery of novel inhibitors.
  • Computer-aided drug development approaches are advancing the identification of ZBP inhibitors.

Conclusions:

  • ZBPs represent attractive therapeutic targets for infectious and immune diseases.
  • Structure-based drug design is a promising strategy for developing ZBP inhibitors.
  • Further research in this area could lead to new treatments for various diseases.