Related Experiment Video
Updated: Jun 15, 2026

Formation of Covalent DNA Adducts by Enzymatically Activated Carcinogens and Drugs In Vitro and Their Determination by 32P-postlabeling
Published on: March 20, 2018
Gene expression changes induced by the human carcinogen aristolochic acid I in renal and hepatic tissue of mice
Volker M Arlt1, Jie Zuo, Kristina Trenz
1Section of Molecular Carcinogenesis, Institute of Cancer Research, Sutton, Surrey, United Kingdom. volker.arlt@icr.ac.uk
Abstract:
Aristolochic acid (AA) is the causative agent of urothelial tumors associated with AA nephropathy and is also implicated in the development of Balkan endemic nephropathy-associated urothelial tumors. These tumors contain AA-characteristic TP53 mutations. We examined gene expression changes in Hupki (human TP53 knock-in) mice after treatment with aristolochic acid I (AAI) by gavage (5 mg/kg body weight). After 3, 12 and 21 days of treatment gene expression profiles were investigated using Agilent Whole Mouse 44K Genome Oligo Array. Expression profiles were significantly altered by AAI treatment in both target (kidney) and nontarget (liver) tissue. Renal pathology and DNA adduct analysis confirmed kidney as the target tissue of AAI-induced toxicity. Gene ontology for functional analysis revealed that processes related to apoptosis, cell cycle, stress response, immune system, inflammatory response and kidney development were altered in kidney. Canonical pathway analysis indicated Nfκb, aryl hydrocarbon receptor, Tp53 and cell cycle signaling as the most important pathways modulated in kidney. Expression of Nfκb1 and other Nfκb-target genes was confirmed by quantitative real-time PCR (qRT-PCR) and was consistent with the induction of Nfκb1 protein. Myc oncogene, frequently overexpressed in urothelial tumors, was upregulated by AAI on the microarrays and confirmed by qRT-PCR and protein induction. Collectively we found that microarray gene expression analysis is a useful tool to define tissue-specific responses in AAI-induced toxicity. Several genes identified such as TP53, Rb1, Mdm2, Cdkn2a and Myc are frequently affected in human urothelial cancer, and may be valuable prognostic markers in future clinical studies.
Insights
Aristolochic acid (AA) causes kidney toxicity and urothelial tumors by altering gene expression, particularly affecting TP53 and Myc pathways. This study highlights microarray analysis as a tool to identify potential prognostic markers for human urothelial cancer.
Area of Science:
- Toxicology
- Genomics
- Oncology
Background:
- Aristolochic acid (AA) is linked to urothelial tumors and nephropathy.
- AA-associated tumors exhibit characteristic TP53 mutations.
Purpose of the Study:
- To investigate gene expression changes in mice treated with aristolochic acid I (AAI).
- To identify molecular pathways and potential biomarkers involved in AAI-induced toxicity and tumorigenesis.
Main Methods:
- Gene expression profiling using Agilent Whole Mouse 44K Genome Oligo Array in Hupki mice treated with AAI.
- Renal pathology, DNA adduct analysis, and quantitative real-time PCR (qRT-PCR) for validation.
- Gene ontology and canonical pathway analysis.
Main Results:
- AAI significantly altered gene expression in both kidney and liver tissues.
- Kidney was confirmed as the target organ, with altered pathways including apoptosis, cell cycle, immune response, and Nfκb signaling.
- Upregulation of Myc oncogene and modulation of TP53 pathway genes were observed.
Conclusions:
- Microarray analysis is effective for defining tissue-specific responses to AAI toxicity.
- Identified genes (TP53, Myc, Rb1, Mdm2, Cdkn2a) are frequently altered in human urothelial cancer and may serve as prognostic markers.

