The quadrupole enhanced 1H spin-lattice relaxation of the amide proton in slow tumbling proteins
Related Experiment Video
Updated: Jun 15, 2026

NMR 15N Relaxation Experiments for the Investigation of Picosecond to Nanoseconds Structural Dynamics of Proteins
Published on: November 1, 2024
1Department of Chemistry, Biological and Computational Chemistry, Umeå University, 901 87 UMEA, Sweden. per-olof.westlund@chem.umu.se
Abstract:
An analysis, based on the stochastic Liouville approach, is presented of the R(1)-NMRD or field dependent spin-lattice relaxation rate of amide protons. The proton relaxivity, displayed as R(1)-NMRD profiles, is calculated for a reorienting (1)H-(14)N spin group, where the inter spin coupling is due to spin dipole-dipole coupling or the scalar coupling. The quadrupole nucleus (14)N has an asymmetry parameter eta = 0.4 and a quadrupole interaction which is modulated by the overall reorientational motion of the protein. In the very slow reorientational regime, omega(Q)tau(R) >> 1 and tau(R) > or = 2.0 micros, both the dipole-dipole coupling and the scalar coupling yield a T(1)-NMRD profile with three marked peaks of proton spin relaxation enhancement. These peaks appear when the proton Larmor frequency, omega(I), matches the nuclear quadrupole spin transition frequencies: omega(1) = omega(Q)2eta/3, omega(2) = omega(Q)(1-eta/3) and omega(3) = omega(Q)(1 + eta/3), and the quadrupole spin system thus acts as a relaxation sink. The relative relaxation enhancements of the peaks are different for the dipole-dipole and the scalar coupling. Considering the dipole-dipole coupling, the low frequency peak, omega(1), is small compared to the high field peaks whereas for the scalar coupling the situation is changed. For slow tumbling proteins with a correlation time of tau(R) = 400 ns, omega(2) and omega(3) are not resolved but become one relatively broad peak. At even faster reorientation, tau(R) < 60 ns, the marked peaks disappear. In this motional regime, the main effect of the cross relaxation phenomenon is a subtle perturbation of the main amide proton T(1) NMRD dispersion. The low field part of it can be approximately described by a Lorentzian function: R(DD,SC)(0.01)/(1 + (omega(I)tau(R)3/2)(2)) whereas the high field part coincides with R(DD,SC)(0.01)/(1 + (omega(I)tau(R))(2)).
More Related Videos
Related Concept Videos
Atomic Nuclei: Types of Nuclear Relaxation
In spin–lattice or longitudinal relaxation, the excited spins exchange energy with the surrounding lattice as they return to the lower energy level. Among several mechanisms that contribute to spin–lattice relaxation, magnetic dipolar interactions are significant. Here, the excited nucleus transfers energy to a nearby...
¹H NMR of Conformationally Flexible Molecules: Temporal Resolution
¹H NMR: Interpreting Distorted and Overlapping Signals
As Δν decreases and the signals move closer, the doublets appear increasingly distorted. The intensities of the inner lines increase at the cost of those of the outer lines as the signals are slanted or...
¹H NMR of Labile Protons: Temporal Resolution
The –OH proton in alcohols typically appears in the range of δ 2 to 5 ppm but can vary depending on the specific...
Double Resonance Techniques: Overview
Spin decoupling is usually achieved by...
Interpreting ¹H NMR Signal Splitting: The (n + 1) Rule

![Measuring the Spin-Lattice Relaxation Magnetic Field Dependence of Hyperpolarized [1-13C]pyruvate](/_next/image?url=https%3A%2F%2Fcloudfront.jove.com%2FCDNSource%2Fteasers%2F59399.jpg&w=3840&q=50)