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Published on: October 9, 2020
Tracing the evolution of tissue identity with microRNAs
Katrien De Mulder1, Eugene Berezikov
1Hubrecht Institute and University Medical Center Utrecht, Uppsalalaan 8, Utrecht, The Netherlands.
Genome Biology
|April 1, 2010
Summary
This study compares microRNA expression to understand tissue evolution in Bilaterians. It reveals insights into the ancestral origins of microRNAs and their role in early tissue development.
Area of Science:
- Evolutionary Biology
- Genomics
- Developmental Biology
Background:
- MicroRNAs (miRNAs) are small non-coding RNAs crucial for gene regulation.
- Understanding miRNA evolution provides insights into developmental processes.
- The last common ancestor of Bilaterians offers a window into early animal evolution.
Purpose of the Study:
- To compare microRNA expression patterns across various bilaterian tissues.
- To infer the presence and function of microRNAs in the last common ancestor of Bilaterians.
- To place the evolution of microRNAs within the broader context of tissue evolution.
Main Methods:
- Comparative transcriptomics analysis of microRNA expression.
- Bioinformatic reconstruction of ancestral microRNA repertoires.
- Phylogenetic analysis of microRNA gene families.
Main Results:
- Identification of conserved microRNA families present in the last common ancestor.
- Correlation between specific microRNA expression and the emergence of distinct tissue types.
- Evidence for co-evolution of microRNAs and tissue complexity.
Conclusions:
- MicroRNAs played a significant role in the early evolution of bilaterian tissues.
- The ancestral bilaterian genome likely possessed a core set of regulatory microRNAs.
- This study provides a framework for understanding miRNA-driven developmental innovations.
Related Concept Videos
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
