Related Experiment Video
Updated: Jun 14, 2026

Quantification of γH2AX Foci in Response to Ionising Radiation
Published on: April 6, 2010
AIF promotes chromatinolysis and caspase-independent programmed necrosis by interacting with histone H2AX
Cédric Artus1, Hanan Boujrad, Aïda Bouharrour
1Centre de Recherche des Cordeliers, Paris, France.
Abstract:
Programmed necrosis induced by DNA alkylating agents, such as MNNG, is a caspase-independent mode of cell death mediated by apoptosis-inducing factor (AIF). After poly(ADP-ribose) polymerase 1, calpain, and Bax activation, AIF moves from the mitochondria to the nucleus where it induces chromatinolysis and cell death. The mechanisms underlying the nuclear action of AIF are, however, largely unknown. We show here that, through its C-terminal proline-rich binding domain (PBD, residues 543-559), AIF associates in the nucleus with histone H2AX. This interaction regulates chromatinolysis and programmed necrosis by generating an active DNA-degrading complex with cyclophilin A (CypA). Deletion or directed mutagenesis in the AIF C-terminal PBD abolishes AIF/H2AX interaction and AIF-mediated chromatinolysis. H2AX genetic ablation or CypA downregulation confers resistance to programmed necrosis. AIF fails to induce chromatinolysis in H2AX or CypA-deficient nuclei. We also establish that H2AX is phosphorylated at Ser139 after MNNG treatment and that this phosphorylation is critical for caspase-independent programmed necrosis. Overall, our data shed new light in the mechanisms regulating programmed necrosis, elucidate a key nuclear partner of AIF, and uncover an AIF apoptogenic motif.
Insights
DNA alkylating agents trigger programmed necrosis via apoptosis-inducing factor (AIF). AIF interacts with histone H2AX in the nucleus, forming a complex with cyclophilin A (CypA) to degrade DNA and cause cell death.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Programmed necrosis is a caspase-independent cell death pathway.
- Apoptosis-inducing factor (AIF) mediates programmed necrosis induced by DNA alkylating agents.
- The nuclear functions of AIF remain largely uncharacterized.
Purpose of the Study:
- To elucidate the molecular mechanisms of AIF's nuclear action in programmed necrosis.
- To identify key nuclear partners and motifs involved in AIF-mediated cell death.
Main Methods:
- Investigated AIF interaction with nuclear proteins using deletion and mutagenesis of AIF's C-terminal proline-rich binding domain (PBD).
- Assessed the role of histone H2AX and cyclophilin A (CypA) in AIF-induced chromatinolysis and programmed necrosis.
- Analyzed H2AX phosphorylation at Ser139 following DNA alkylating agent treatment.
Main Results:
- AIF directly binds to histone H2AX in the nucleus via its PBD.
- This AIF-H2AX interaction is essential for forming a DNA-degrading complex with CypA, leading to chromatinolysis and programmed necrosis.
- Genetic ablation of H2AX or downregulation of CypA confers resistance to programmed necrosis.
- H2AX phosphorylation at Ser139 is critical for this cell death pathway.
Conclusions:
- Histone H2AX is a crucial nuclear partner for AIF in programmed necrosis.
- The AIF PBD acts as an apoptogenic motif, mediating interaction with H2AX and subsequent DNA degradation.
- This study reveals novel insights into the mechanisms of programmed necrosis and the nuclear role of AIF.
Related Concept Videos
Caspases
The Intrinsic Apoptotic Pathway
The Extrinsic Apoptotic Pathway
Apoptosis
Necrosis
Morphological Manifestations of Necrosis
Necrotic cells show different types of morphological appearance depending on the type of tissue and infection. In coagulative necrosis, cells become anucleated and die, but their...
Autophagic Cell Death
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and pro-apoptotic...

