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Coordinated postnatal down-regulation of multiple growth-promoting genes: evidence for a genetic program limiting
Julian C Lui1, Patricia Forcinito, Maria Chang
1Developmental Endocrinology Branch, Program in Developmental Endocrinology and Genetics, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, CRC, Room 1-3330, 10 Center Dr., MSC-1103, Bethesda, MD 20892-1103, USA. luichunk@mail.nih.gov
Insights
Organ growth slows and stops because early life growth triggers a gene program that reduces cell proliferation. This discovery sheds light on the mechanisms behind growth cessation in juvenile animals.
Area of Science:
- Developmental biology
- Molecular biology
- Epigenetics
Background:
- Adults cease growing, while children continue to develop.
- Organ growth cessation results from a progressive decline in cell proliferation starting in early life.
- The mechanisms driving this growth deceleration remain largely unknown.
Purpose of the Study:
- To identify the gene expression programs associated with growth deceleration in juvenile rats.
- To investigate the underlying epigenetic mechanisms and physiological drivers of this growth program.
Main Methods:
- Expression microarray and real-time PCR were used to identify gene expression patterns in rat lung, kidney, and liver.
- Gene ontology analyses and siRNA-mediated knockdown were employed to assess gene function.
- A tryptophan-deficient diet was used to temporarily inhibit juvenile growth, followed by microarray analysis.
Main Results:
- A common gene expression program was identified in multiple organs during growth deceleration in juvenile rats.
- Many down-regulated genes in this program were found to be growth-promoting.
- Declining histone H3K4 trimethylation with age suggested epigenetic regulation, and growth inhibition delayed the genetic program, indicating it's growth-driven, not age-driven.
Conclusions:
- Early life growth induces a progressive down-regulation of proliferation-stimulating genes.
- This genetic program leads to the deceleration and eventual cessation of organ growth.
- Epigenetic mechanisms and body growth itself appear to drive this process.
Abstract:
Children grow, but adults do not. The cessation of growth in multiple organs is the end result of a progressive decline in cell proliferation beginning in early life. The mechanisms responsible for this growth deceleration are largely unknown. Using expression microarray and real-time PCR, we identified a common program of gene expression in lung, kidney, and liver during growth deceleration in juvenile rats. Gene ontology analyses and siRNA-mediated knockdown in vitro indicated that many of the down-regulated genes are growth promoting. Down-regulated genes in the program showed declining histone H3K4 trimethylation with age, implicating underlying epigenetic mechanisms. To investigate the physiological processes driving the genetic program, a tryptophan-deficient diet was used to temporarily inhibit juvenile growth in newborn rats for 4 wk. Afterward, microarray analysis showed that the genetic program had been delayed, implying that it is driven by body growth itself rather than age. Taken together, the findings suggest that growth in early life induces progressive down-regulation of a large set of proliferation-stimulating genes, causing organ growth to slow and eventually cease.
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