Related Experiment Video
Updated: Jun 14, 2026

Spatio-Temporal Manipulation of Small GTPase Activity at Subcellular Level and on Timescale of Seconds in Living Cells
Published on: March 9, 2012
Ribosomal protein S6 kinase from TOP mRNAs to cell size
Oded Meyuhas1, Avigail Dreazen
1Department of Biochemistry and Molecular Biology, Institute for Medical Research Israel-Canada, The Hebrew University-Hadassah Medical School, Jerusalem, Israel.
Abstract:
Ribosomal protein S6 kinase (S6K) has been implicated in the phosphorylation of multiple substrates and is subject to activation by a wide variety of signals that converge at mammalian target of rapamycin (mTOR). In the course of the search for its physiological role, it was proposed that S6K activation and ribosomal protein S6 (rpS6) phosphorylation account for the translational activation of a subgroup of transcripts, the TOP mRNAs. The structural hallmark of these mRNAs is an oligopyrimidine tract at their 5'-terminus, known as the 5'-TOP motif. TOP mRNAs consists of about 90 members that encode multiple components of the translational machinery, such as ribosomal proteins and translation factors. The translation efficiency of TOP mRNAs indeed correlates with S6K activation and rpS6 phosphorylation, yet recent biochemical and genetic studies have established that, although S6K and TOP mRNAs respond to similar signals and are regulated by mTOR, they maintain no cause and effect relationship. Instead, S6K is primarily involved in regulation of cell size, and affects glucose homeostasis, but is dispensable for global protein synthesis, whereas translational efficiency of TOP mRNAs is a determinant of the cellular protein synthesis capacity. Despite extensive studies of their function and mode of regulation, the mechanism underlying the effect of S6K on the cell size, as well as the trans-acting factor that mediates the translational control of TOP mRNAs, still await their identification.
Insights
Ribosomal protein S6 kinase (S6K) regulates cell size and glucose homeostasis, not global protein synthesis. Instead, 5'-TOP motif mRNA translation efficiency determines cellular protein synthesis capacity.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Ribosomal protein S6 kinase (S6K) is activated by mammalian target of rapamycin (mTOR) and phosphorylates multiple substrates.
- S6K activation and ribosomal protein S6 (rpS6) phosphorylation were previously thought to drive translation of 5'-TOP motif mRNAs.
- 5'-TOP mRNAs encode components of the translational machinery and are characterized by an oligopyrimidine tract at their 5' terminus.
Purpose of the Study:
- To clarify the physiological role of S6K in relation to TOP mRNA translation.
- To investigate the distinct functions of S6K and TOP mRNA translation in cellular processes.
- To identify the mechanisms underlying S6K's effect on cell size and the factors controlling TOP mRNA translation.
Main Methods:
- Biochemical assays to measure S6K activity and rpS6 phosphorylation.
- Genetic studies to assess the necessity of S6K for protein synthesis.
- Analysis of TOP mRNA translation efficiency under various signaling conditions.
Main Results:
- S6K and TOP mRNA translation are both mTOR-regulated but lack a direct causal relationship.
- S6K primarily regulates cell size and glucose homeostasis, and is dispensable for global protein synthesis.
- Translational efficiency of TOP mRNAs is a key determinant of cellular protein synthesis capacity.
Conclusions:
- S6K and TOP mRNA translation represent distinct regulatory pathways.
- Understanding S6K's role in cell size control and identifying TOP mRNA translational regulators remain key research areas.
Related Concept Videos
Translational Regulation
Regulation of Expression at Multiple Steps
Cells Coordinate Growth and Proliferation
Regulation of Nuclear Protein Sorting
Ribosome Profiling
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique helps...
Regulated mRNA Transport

