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Interactions between residues in the oncomodulin CD domain influence Ca2+ ion-binding affinity
C L Treviño1, J M Boschi, M T Henzl
1Department of Chemistry, New Mexico State University, Las Cruces 88003.
Abstract:
Despite striking sequence homology with rat parvalbumin, oncomodulin exhibits much lower affinity for Ca2+ ion. We are attempting to identify the structural basis for this difference by systematically substituting the parvalbumin residue for the oncomodulin residue at points of nonidentity. In this paper, we examine two mutations in the helical segments flanking the CD ion-binding loop. Replacement of Asp-45 in the C helix by lysine, to produce D45K, reduces the dissociation constant for Ca2+ at the CD site from 0.81 to 0.53 microM. Replacement of Lys-69 in the D helix by glycine, to afford K69G, similarly reduces KCa to 0.59 microM. Both mutations perturb the Eu3+ 7Fo----5Do spectral parameters. We also examine the consequences of simultaneous mutations involving positions 57, 59, 60, and 69. Ca(2+)-binding assays and Eu3+ luminescence measurements indicate that there is a conformational interaction between residues 57 and 69 and that this interaction is modulated by residues 59 and 60. When the mutations at positions 57, 59, 60, and 69 are combined, the resulting variant exhibits a KCa value for the CD site of 0.25 microM, reflecting a 3-fold increase in affinity relative to the wild-type protein. Moreover, the pK alpha governing the interconversion of low and high pH forms of the Eu3+ 7Fo----5Do spectrum is increased to 8.1, very close to the value of 8.25 determined previously for rat parvalbumin. In this paper, we also complete our survey of single mutations in the CD loop by examining L58I. Replacement of Leu-58 by isoleucine reduces the affinity of the CD site for Ca2+, raising KCa to 2.2 microM. Finally, we revise our previous estimate of the KCa value for Y57F downward, from 0.80 to 0.64 microM. The earlier result is believed to have been inflated by heterogeneity in the preparation, a consequence of proteolysis.
Insights
Researchers investigated oncomodulin and parvalbumin calcium-binding differences by making specific protein mutations. These mutations enhanced calcium affinity, revealing key structural insights for calcium-binding proteins.
Area of Science:
- Biochemistry
- Structural Biology
- Protein Engineering
Background:
- Oncomodulin has lower calcium (Ca2+) affinity than rat parvalbumin despite sequence similarity.
- Understanding the structural basis for this difference is crucial for protein function studies.
Purpose of the Study:
- To identify the structural determinants of differential Ca2+ affinity between oncomodulin and parvalbumin.
- To engineer oncomodulin variants with enhanced Ca2+ binding properties.
Main Methods:
- Site-directed mutagenesis was used to substitute parvalbumin residues into oncomodulin.
- Calcium (Ca2+) binding affinities were measured using Ca(2+)-binding assays.
- Europium (Eu3+) luminescence spectroscopy was employed to probe conformational changes and pH-dependent properties.
Main Results:
- Specific mutations (D45K, K69G) in helical segments flanking the CD loop reduced the Ca2+ dissociation constant (KCa).
- Combined mutations at positions 57, 59, 60, and 69 significantly increased Ca2+ affinity (3-fold), approaching parvalbumin's affinity.
- Mutations influenced Eu3+ spectral parameters, indicating conformational changes and interactions between residues.
Conclusions:
- Residues in the helical segments and CD loop critically modulate Ca2+ binding affinity.
- Conformational interactions between residues 57 and 69, modulated by 59 and 60, are key to affinity.
- Protein engineering strategies can successfully enhance Ca2+ binding affinity in oncomodulin.