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Related Concept Videos

Urine Studies I: Urinalysis01:29

Urine Studies I: Urinalysis

Urinalysis is a widely used diagnostic test that analyzes urine's physical, chemical, and microscopic characteristics. Healthcare providers use it to detect and monitor various health conditions, including renal disease, urinary tract infections (UTIs), diabetes, and metabolic or systemic disorders.Components of UrinalysisUrinalysis consists of three primary components: physical, chemical, and microscopic examination. Each provides unique insights into the urine sample and, by extension, the...

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Related Experiment Video

Updated: Jun 13, 2026

Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis
14:48

Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis

Published on: May 8, 2021

Standardized preprocessing of urine for proteome analysis.

Georg Martin Fiedler1, Uta Ceglarek, Alexander Leichtle

  • 1Institute of Laboratory Medicine, Clinical Chemistry and Molecular Diagnostics, University Hospital Leipzig, Medical Faculty, University Leipzig, Leipzig, Germany.

Methods in Molecular Biology (Clifton, N.J.)
|April 22, 2010
PubMed
Summary
This summary is machine-generated.

Standardizing urine pretreatment is crucial for reliable proteome and peptidome profiling. This study presents a validated protocol using magnetic bead separation and MALDI-TOF MS for reproducible biomarker discovery.

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One-step Metabolomics: Carbohydrates, Organic and Amino Acids Quantified in a Single Procedure
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Published on: June 25, 2010

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Last Updated: Jun 13, 2026

Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis
14:48

Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis

Published on: May 8, 2021

One-step Metabolomics: Carbohydrates, Organic and Amino Acids Quantified in a Single Procedure
09:28

One-step Metabolomics: Carbohydrates, Organic and Amino Acids Quantified in a Single Procedure

Published on: June 25, 2010

Area of Science:

  • Biochemistry
  • Proteomics
  • Analytical Chemistry

Background:

  • Urine proteome/peptidome profiling offers potential for novel disease biomarker discovery.
  • Preanalytic variables significantly impact the reliability of proteome/peptidome analysis.
  • Standardization is essential for consistent and meaningful results in biomarker research.

Purpose of the Study:

  • To present a validated pretreatment protocol for human urine.
  • To standardize preanalytic modalities for reproducible peptidome profiling.
  • To facilitate consistent data generation for biomarker discovery and proteomic experiments.

Main Methods:

  • Development and validation of a pretreatment protocol for human urine samples.
  • Utilized magnetic bead (MB) separation technique.
  • Employed matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS) for analysis.

Main Results:

  • The validated pretreatment protocol standardizes preanalytic variables.
  • Achieved reproducible peptidome profiling of human urine.
  • Enabled generation of consistent and reliable data for biomarker discovery.

Conclusions:

  • A validated pretreatment protocol is essential for reproducible urine peptidome profiling.
  • Magnetic bead separation combined with MALDI-TOF MS provides a reliable method.
  • This approach supports robust biomarker discovery and general proteomic studies.