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MicroRNAs and potential target interactions in psoriasis
John R Zibert1, Marianne B Løvendorf, Thomas Litman
1Department of Dermato-Allergology, Gentofte Hospital, University of Copenhagen, Niels Andersens Vej 65, 2900 Hellerup, Denmark. johnzibert@gmail.com
Background:
Psoriasis is a chronic inflammatory skin disease often seen in patients with a genetic susceptibility. MicroRNAs (miRNA) are endogenous, short RNA molecules that can bind to parts of mRNA target genes, thus inhibiting their translation and causing accelerated turnover or transcript degradation. MicroRNAs are important in the pathogenesis of human diseases such as immunological disorders, as they regulate a broad range of biological processes.
Objective:
We investigated miRNA-mRNA interactions in involved (PP) and non-involved (PN) psoriatic skin compared with healthy skin (NN).
Methods:
Biopsies were obtained from PP, PN and NN, the miRNA and mRNA expression was analyzed by microarray techniques and a subset of miRNAs and mRNAs were validated by q-RT-PCR. Novel target interactions in psoriasis were found using PubMed, miRBase and RNAhybrid. In addition, TIMP3 protein expression was studied in PP, PN and NN. Finally, the miR-221/2-TIMP3 target interaction was studied in primary human keratinocytes by endogenous overexpression of the miRNAs.
Results:
We identified 42 upregulated miRNAs and 5 downregulated miRNAs in PP compared with NN, and only few deregulated miRNAs in PN compared with NN. Based on the miRNA and mRNA profiles miR-21, -205, -221 and -222 were found to have the following potential mRNA targets in psoriatic skin: PDCD4, TPM1, P57, C-KIT, RTN4, SHIP2, TIMP3, RECK and NFIB. The identified target mRNAs were likely to be involved in cellular growth, proliferation, apoptosis and degradation of the extracellular matrix. Finally we found that TIMP3 is downregulated in psoriatic skin. In vitro overexpression of miR-221 and miR-222 lead to degradation of TIMP3 resulting in decreased TIMP3 protein level.
Conclusion:
Our data indicate several novel important associations for miRNAs in psoriasis and in particular the miR-221/2-TIMP3 target interaction could among others play a role in the psoriasis pathogenesis.
Insights
MicroRNAs (miRNAs) are key regulators in psoriasis. This study identified novel miRNA-mRNA interactions, including the miR-221/2-TIMP3 pathway, suggesting their role in psoriasis pathogenesis.
Area of Science:
- Dermatology
- Molecular Biology
- Genetics
Background:
- Psoriasis is a chronic inflammatory skin condition with a genetic basis.
- MicroRNAs (miRNAs) are crucial regulators of gene expression involved in various biological processes, including immunological disorders.
- Dysregulation of miRNAs contributes to the pathogenesis of human diseases.
Purpose of the Study:
- To investigate microRNA (miRNA) and messenger RNA (mRNA) interactions in psoriatic skin.
- To compare miRNA and mRNA profiles in involved psoriatic skin (PP), non-involved psoriatic skin (PN), and healthy skin (NN).
Main Methods:
- Microarray analysis of miRNA and mRNA expression in PP, PN, and NN skin biopsies.
- Validation of selected miRNA and mRNA using quantitative reverse transcription polymerase chain reaction (q-RT-PCR).
- Bioinformatic analysis (PubMed, miRBase, RNAhybrid) to identify novel miRNA-mRNA targets.
- Assessment of TIMP3 protein expression and in vitro study of miR-221/2-TIMP3 interaction in keratinocytes.
Main Results:
- Identified 42 upregulated and 5 downregulated miRNAs in psoriatic skin (PP) compared to healthy skin (NN).
- Discovered potential mRNA targets for miR-21, -205, -221, and -222 in psoriatic skin, including genes involved in cellular growth, proliferation, apoptosis, and extracellular matrix degradation.
- Confirmed downregulation of TIMP3 in psoriatic skin and demonstrated that miR-221 and miR-222 overexpression reduces TIMP3 protein levels.
Conclusions:
- Several novel miRNA associations in psoriasis pathogenesis were identified.
- The miR-221/2-TIMP3 interaction is a significant finding that may play a role in the development of psoriasis.
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