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Multicenter collaborative study for standardization of Candida albicans genotyping using a polymorphic microsatellite
Dea Garcia-Hermoso1, Donna M MacCallum, Timothy J Lott
1Institut Pasteur, Unité de Mycologie Moléculaire, Centre National de Référence Mycologie et Antifongiques and CNRS URA3012, Paris, France. dea.garcia-hermoso@pasteur.fr
Microsatellite genotyping for Candida albicans shows variability in fragment size results between labs. However, using an allelic ladder ensures correct allele assignment, enabling reliable data sharing across different laboratories.
Area of Science:
- Microbiology
- Genetics
Background:
- Microsatellite-based genotyping is crucial for Candida albicans.
- Fragment size determination in genotyping can vary between laboratories due to differing electrophoretic conditions.
Purpose of the Study:
- To assess the interlaboratory reproducibility of microsatellite-based genotyping for Candida albicans.
- To determine if an allelic ladder can standardize results across different labs.
Main Methods:
- Six laboratories participated in the study.
- An allelic ladder was provided to all participating laboratories.
- Microsatellite genotyping was performed on Candida albicans samples.
Main Results:
- Variations in fragment size determinations were observed between laboratories.
- Despite size variations, correct allele assignments were consistently achieved.
- The use of an allelic ladder facilitated accurate allele identification.
Conclusions:
- Microsatellite genotyping for Candida albicans can be standardized across laboratories.
- Allelic ladders are effective tools for ensuring accurate allele assignment.
- Standardized genotyping methods enhance the transportability and reliability of Candida albicans data.
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