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Published on: February 20, 2015
Detection of Jeotgalicoccus spp. in poultry house air
Elena Martin1, Kerstin Fallschissel, Peter Kämpfer
1Bundesanstalt für Arbeitsschutz und Arbeitsmedizin, Nöldnerstrasse 40-42, 10317 Berlin, Germany.
Abstract:
Investigations of bioaerosols collected from turkey, chicken and duck houses, as well as from a duck slaughterhouse, each in triplicate, revealed that 4-18% of 16S rRNA gene sequences in investigated 16S rRNA gene clone libraries were closely related to Jeotgalicoccus spp. J. halotolerans- and J. psychrophilus-related sequences were obtained in all investigated bioaerosol samples and formed a distinct group with sequences of both species type strains, which were collectively entitled Jeot-cluster-I. For a quantification of Jeot-cluster-I bacteria, a group specific PCR primer combination targeting the 16S rRNA genes was developed. Estimated concentrations by quantitative real-time PCR analyses revealed cell numbers between 10(4) and 10(6)Jeotgalicoccus cellsm(-3) air in turkey, duck, and chicken houses, respectively. These results indicated the remarkable proportion (1-39%) of total cell counts and the hitherto unknown wide distribution of Jeotgalicoccus spp. in the poultry rearing industry.
Insights
Jeotgalicoccus bacteria are widespread in poultry houses, making up a significant portion of airborne microbes. This study developed a method to quantify these bacteria in the air.
Area of Science:
- Environmental microbiology
- Poultry science
- Bacterial genomics
Background:
- Bioaerosols in poultry houses can harbor diverse microbial communities.
- Understanding the composition of airborne bacteria is crucial for animal health and biosecurity.
- Jeotgalicoccus species have not been extensively studied in poultry environments.
Purpose of the Study:
- To investigate the prevalence and abundance of Jeotgalicoccus species in poultry house bioaerosols.
- To develop a quantitative method for detecting Jeotgalicoccus cluster I (Jeot-cluster-I) bacteria.
- To assess the proportion of Jeotgalicoccus spp. within total airborne microbial populations in poultry settings.
Main Methods:
- Collection and analysis of bioaerosols from turkey, chicken, and duck houses.
- 16S rRNA gene sequencing to identify bacterial populations.
- Development of a group-specific PCR primer for Jeot-cluster-I.
- Quantitative real-time PCR (qPCR) for bacterial enumeration.
Main Results:
- Jeotgalicoccus-related sequences constituted 4-18% of 16S rRNA gene sequences in clone libraries.
- Jeotgalicoccus halotolerans and J. psychrophilus were detected in all samples, forming Jeot-cluster-I.
- qPCR revealed Jeotgalicoccus cell concentrations ranging from 10^4 to 10^6 cells/m^3 of air.
- Jeotgalicoccus spp. represented 1-39% of total bacterial counts in the air.
Conclusions:
- Jeotgalicoccus species are widely distributed in the poultry industry's airborne environments.
- A significant proportion of airborne bacteria in poultry houses belong to the Jeotgalicoccus genus.
- The developed qPCR method allows for effective quantification of these bacteria in poultry bioaerosols.
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