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Bacterial Artificial Chromosomes: A Functional Genomics Tool for the Study of Positive-strand RNA Viruses
Published on: December 29, 2015
Intrinsic disorder in the core proteins of flaviviruses
Roland Ivanyi-Nagy1, Jean-Luc Darlix
1Molecular Parasitology Group, The Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 9DS, UK. roland.ivanyi-nagy@ndm.ox.ac.uk.
Abstract:
Hepatitis C virus and related viruses in the Flaviviridae family (such as dengue virus, yellow fever virus or West Nile virus) are amongst the most important human pathogens, causing substantial morbidity and mortality world-wide. The production of viral progeny in Flaviviridae is orchestrated by the small, multifunctional core protein, which coats and condenses the viral genomic RNA during Nucleocapsid formation. In addition to their structural role, mounting experimental evidence links core proteins to viral persistence and pathogenesis, by virtue of their promiscuous interactions with host cell factors. In this review, we summarize the present knowledge about the structure of Flaviviridae core proteins and discuss the importance of flexible, intrinsically unstructured protein regions in viral assembly and hub formation in the virus-host protein-protein interaction network (infection network).
Insights
Flaviviridae core proteins are crucial for viral assembly and pathogenesis. Flexible regions within these proteins are key to their function in viral replication and host interactions.
Area of Science:
- Virology
- Structural Biology
- Molecular Biology
Background:
- Hepatitis C virus and other Flaviviridae viruses cause significant global health issues.
- The core protein is essential for Flaviviridae replication, mediating RNA packaging and nucleocapsid formation.
- Core proteins interact with host factors, influencing viral persistence and disease.
Purpose of the Study:
- To review the current understanding of Flaviviridae core protein structures.
- To highlight the role of intrinsically unstructured regions in viral assembly.
- To discuss the significance of core proteins as hubs in virus-host interactions.
Main Methods:
- Literature review of structural and functional studies on Flaviviridae core proteins.
- Analysis of protein-protein interaction networks.
- Examination of the role of intrinsically disordered regions in viral pathogenesis.
Main Results:
- Flaviviridae core proteins possess diverse structures, often featuring flexible regions.
- These flexible regions are critical for efficient viral assembly and RNA condensation.
- Core proteins act as central hubs, mediating numerous interactions with host cell machinery.
Conclusions:
- Understanding Flaviviridae core protein structure, especially flexible regions, is vital for antiviral strategies.
- The multifaceted roles of core proteins in assembly and host interaction underscore their importance in pathogenesis.
- Targeting these flexible regions could offer novel therapeutic avenues against Flaviviridae infections.
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