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Refining the association of MHC with multiple sclerosis in African Americans
Joseph P McElroy1, Bruce A C Cree, Stacy J Caillier
1Department of Neurology, University of California, San Francisco, CA 94143, USA. joseph.mcelroy@ucsf.edu
Abstract:
Multiple sclerosis (MS) is a common demyelinating disease of the central nervous system mediated by autoimmune and neurodegenerative pathogenic mechanisms. Multiple genes account for its moderate heritability, but the only genetic region shown to have a large replicable effect on MS susceptibility is the major histocompatibility complex (MHC). Strong linkage disequilibrium (LD) across the MHC has made it difficult to fully characterize individual genetic contributions of this region to MS risk in previous studies. African Americans are at a lower risk for MS when compared with northern Europeans and Americans of European descent, but greater haplotypic diversity and distinct patterns of LD suggest that this population may be particularly informative for fine-mapping efforts. To examine the role of the MHC in African American MS, a case-control association study was performed with 499 African American MS patients and 750 African American controls that were genotyped for 6040 MHC region single nucleotide polymorphisms (SNPs). A replication data set consisting of 451 African American patients and 718 African American controls was genotyped for selected SNPs. Two MHC class II SNPs, rs2647040 and rs3135021, were significant in the replication cohort and partially tagged DRB1*15 alleles. Surprisingly, in comparison to similar studies of individuals of European descent, the MHC seems to play a smaller role in MS susceptibility in African Americans, consistent with pervasive genetic heterogeneity across ancestral groups, and may explain the difference in MS susceptibility between African Americans and individuals of European descent.
Insights
The major histocompatibility complex (MHC) plays a smaller role in multiple sclerosis (MS) susceptibility in African Americans than in Europeans. This finding, based on a large genetic study, may explain lower MS risk in this population.
Area of Science:
- Neuroimmunology
- Genetics
- Epidemiology
Background:
- Multiple sclerosis (MS) is a central nervous system demyelinating disease with autoimmune and neurodegenerative components.
- The major histocompatibility complex (MHC) is a key genetic region influencing MS susceptibility, but its specific role is complex due to linkage disequilibrium (LD).
- African Americans exhibit lower MS risk than European descendants, with distinct genetic diversity potentially offering insights into MS pathogenesis.
Purpose of the Study:
- To investigate the role of the MHC in multiple sclerosis (MS) susceptibility within the African American population.
- To fine-map the MHC region in African Americans to identify specific genetic variants contributing to MS risk.
- To compare the contribution of the MHC to MS susceptibility between African Americans and individuals of European descent.
Main Methods:
- A case-control association study was conducted using 499 African American MS patients and 750 African American controls.
- Genotyping of 6040 single nucleotide polymorphisms (SNPs) within the MHC region was performed.
- Replication analysis involved genotyping selected SNPs in an independent cohort of 451 African American MS patients and 718 controls.
Main Results:
- Two MHC class II SNPs, rs2647040 and rs3135021, were found to be significant in the replication cohort and partially tagged DRB1*15 alleles.
- The overall contribution of the MHC region to MS susceptibility appeared smaller in African Americans compared to findings in European descent populations.
- Genetic heterogeneity across ancestral groups may contribute to observed differences in MS susceptibility.
Conclusions:
- The MHC plays a less significant role in MS susceptibility among African Americans than previously observed in European populations.
- Distinct patterns of genetic variation and LD in African Americans influence the MHC's contribution to MS risk.
- These findings highlight the importance of considering ancestral diversity in understanding the genetic architecture of multiple sclerosis.