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Published on: August 4, 2019
The tumor suppressors p53, p63, and p73 are regulators of microRNA processing complex
1Genome Discovery, Murungapakkam, India. lakshmanan.boominathan@gmail.com
Abstract:
The tumor suppressors p53, p73, and p63 are known to function as transcription factors. They promote either growth arrest or apoptosis, depending upon the DNA damage. A number of microRNAs (miRNAs) have been shown to function as transcriptional targets of p53 and they appear to aid p53 in promoting growth arrest and apoptosis. However, the question of p53/p63/p73 regulating the miRNA processing complex has not been addressed in depth so far. Comparative/computational genomic analysis was performed using Target scan, Mami, and Diana software to identify miRNAs that regulate the miRNA processing complex. Here, I present evidence for the first time that the tumor suppressors p53, p63, and p73 function as both positive and negative regulators of the miRNA processing components. Curated p53-dependent miRNA expression data was used to identify p53-miRs that target the components of the miRNA-processing complex. This analysis suggests that most of the components (mRNAs' 3'UTR) of the miRNA processing complex are targeted by p53-miRs. Remarkably, this data revealed the conserved nature of p53-miRs in targeting a number of components of the miRNA processing complex. p53/p73/p63 appears to regulate the major components of the miRNA processing, such as Drosha-DGCR8, Dicer-TRBP2, and Argonaute proteins. In particular, p53/p73/p63 appears to regulate the processing of miRNAs, such as let-7, miR-200c, miR-143, miR-107, miR-16, miR-145, miR-134, miR-449a, miR-503, and miR-21. Interestingly, there seems to be a phenotypic similarity between p63(-/-) and dicer(-/-) mice, suggesting that p63 and dicer could regulate each other. In addition, p63, p73, and the DGCR8 proteins contain a conserved interaction domain. Further, promoters of a number of components of the miRNA processing machinery, including dicer and P2P-R, contain p53-REs, suggesting that they could be direct transcriptional targets of p63/p73/p53. Together, this study provides mechanistic insights into how p53, p63, and p73 regulate the components of the miRNA processing; and how p53, TA-p63, and TA-p73 regulated miRNAs inhibit tumorigenesis, EMT, metastasis, and cancer stem cell proliferation.
Insights
Tumor suppressors p53, p63, and p73 regulate microRNA (miRNA) processing components, impacting cancer development. This study reveals how these proteins control miRNA biogenesis, offering new insights into cancer therapy.
Area of Science:
- Molecular Biology
- Cancer Biology
- Genetics
Background:
- Tumor suppressors p53, p73, and p63 are transcription factors involved in cell cycle arrest and apoptosis.
- MicroRNAs (miRNAs) are known targets of p53 and aid in tumor suppression.
- The regulation of miRNA processing by p53, p63, and p73 has not been extensively studied.
Purpose of the Study:
- To investigate the role of tumor suppressors p53, p63, and p73 in regulating the miRNA processing complex.
- To identify specific miRNAs and components of the miRNA processing machinery targeted by these tumor suppressors.
- To elucidate the mechanistic insights into how p53, p63, and p73 influence miRNA biogenesis and its implications in tumorigenesis.
Main Methods:
- Comparative and computational genomic analysis using TargetScan, Mami, and Diana software.
- Analysis of curated p53-dependent miRNA expression data.
- Identification of miRNA response elements (p53-REs) in the promoters of miRNA processing components.
Main Results:
- p53, p63, and p73 act as both positive and negative regulators of miRNA processing components.
- p53-regulated miRNAs target numerous components of the miRNA processing complex, including Drosha-DGCR8, Dicer-TRBP2, and Argonaute proteins.
- Conserved targeting of miRNA processing machinery by p53-regulated miRNAs was observed across species.
- Phenotypic similarities between p63(-/-) and Dicer(-/-) mice suggest a regulatory relationship.
- p63, p73, and DGCR8 share conserved interaction domains.
- Promoters of Dicer and P2P-R contain p53-REs, indicating direct transcriptional regulation by p53/p73/p63.
Conclusions:
- p53, p63, and p73 play a crucial role in regulating the miRNA processing pathway.
- Dysregulation of this pathway by p53/p73/p63-regulated miRNAs contributes to tumorigenesis, epithelial-mesenchymal transition (EMT), metastasis, and cancer stem cell proliferation.
- Understanding these regulatory mechanisms provides mechanistic insights for potential therapeutic strategies against cancer.
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