The ARF tumor suppressor controls ribosome biogenesis by regulating the RNA polymerase I transcription factor TTF-I

Frédéric Lessard1, Françoise Morin, Stacey Ivanchuk

  • 1Cancer Research Centre, Department of Molecular Biology, Medical Biochemistry, and Pathology of Laval University, CHUQ Research Centre, Québec, Québec, Canada.

Molecular Cell
|June 2, 2010
PubMed

Insights

The tumor suppressor p14/p19(ARF) halts cell growth in p53-negative cells by blocking ribosomal RNA synthesis. ARF achieves this by controlling TTF-I

Area of Science:

  • Molecular Biology
  • Cell Biology
  • Cancer Research

Background:

  • The CDKN2A gene product, p14/p19(ARF) (ARF), exhibits tumor suppressor functions.
  • ARF can arrest cell proliferation independently of p53/TP53, particularly in p53-negative cells.
  • This proliferation arrest involves the suppression of ribosomal RNA (rRNA) synthesis.

Purpose of the Study:

  • To elucidate the mechanism by which ARF suppresses rRNA synthesis in p53-negative cells.
  • To investigate the role of ARF in controlling the subnuclear localization of RNA polymerase I transcription termination factor (TTF-I).
  • To understand the involvement of the chaperone NPM/B23 in ARF-mediated rRNA synthesis regulation.

Main Methods:

  • Investigating the subnuclear localization of TTF-I in the presence and absence of ARF.
  • Analyzing the interaction between ARF and the nucleolar localization sequence of TTF-I.
  • Utilizing TTF-I depletion and rescue experiments to assess its role in ARF function.
  • Studying the influence of NPM/B23 on TTF-I shuttling.

Main Results:

  • ARF controls the subnuclear localization of TTF-I, a key factor in rRNA synthesis.
  • ARF binds to the nucleolar localization sequence of TTF-I, inhibiting its import into the nucleolus.
  • This binding causes TTF-I to accumulate in the nucleoplasm, leading to suppressed rRNA synthesis.
  • Depletion of TTF-I mimics ARF's effect on rRNA synthesis, and this effect is reversible with TTF-I reintroduction.

Conclusions:

  • ARF regulates rRNA synthesis by modulating TTF-I nucleolar localization.
  • The interaction between ARF and TTF-I's nucleolar localization sequence is critical for this regulation.
  • These findings clarify the pathway of ARF-mediated rRNA suppression and highlight the role of NPM/B23.

Related Concept Videos

Transcriptional Regulation: Riboswitches01:23

Transcriptional Regulation: Riboswitches

Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
Riboswitches01:56

Riboswitches

Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...
Transcription Attenuation in Prokaryotes02:42

Transcription Attenuation in Prokaryotes

Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure.  Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
Abnormal Proliferation02:23

Abnormal Proliferation

Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the daughter...