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A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
BCR-ABL SH3-SH2 domain mutations in chronic myeloid leukemia patients on imatinib
Daniel W Sherbenou1, Oliver Hantschel, Ines Kaupe
1Cell and Developmental Biology, Oregon Health & Science University, Portland, OR, USA.
Abstract:
Point mutations in the kinase domain of BCR-ABL are the most common mechanism of drug resistance in chronic myeloid leukemia (CML) patients treated with ABL kinase inhibitors, including imatinib. It has also been shown in vitro that mutations outside the kinase domain in the neighboring linker, SH2, SH3, and Cap domains can confer imatinib resistance. In the context of ABL, these domains have an autoinhibitory effect on kinase activity, and mutations in this region can activate the enzyme. To determine the frequency and relevance to resistance of regulatory domain mutations in CML patients on imatinib, we screened for such mutations in a cohort of consecutive CML patients with various levels of response. Regulatory domain mutations were detected in 7 of 98 patients, whereas kinase domain mutations were detected in 29. One mutation (T212R) conferred in vitro tyrosine kinase inhibitor resistance and was associated with relapse, whereas most other mutations did not affect drug sensitivity. Mechanistic studies showed that T212R increased the activity of ABL and BCR-ABL and that T212R-induced resistance may be partially the result of stabilization of an active kinase conformation. Regulatory domain mutations are uncommon but may explain resistance in some patients without mutations in the kinase domain.
Insights
Regulatory domain mutations in BCR-ABL are uncommon in chronic myeloid leukemia (CML) but can cause imatinib resistance, even without kinase domain mutations. One specific mutation, T212R, was linked to relapse in CML patients.
Area of Science:
- Oncology
- Molecular Biology
- Hematology
Background:
- Tyrosine kinase inhibitors (TKIs) like imatinib are standard treatment for chronic myeloid leukemia (CML).
- Drug resistance in CML is often caused by point mutations in the BCR-ABL kinase domain.
- Mutations outside the kinase domain (regulatory domains) may also contribute to TKI resistance by altering enzyme activity.
Purpose of the Study:
- To investigate the frequency and clinical relevance of BCR-ABL regulatory domain mutations in CML patients treated with imatinib.
- To determine if these mutations contribute to imatinib resistance and affect patient outcomes.
Main Methods:
- Screening of a cohort of 98 CML patients for mutations in BCR-ABL regulatory domains.
- In vitro functional assays to assess the impact of identified mutations on kinase activity and drug sensitivity.
- Correlation of mutation status with clinical response and relapse.
Main Results:
- Regulatory domain mutations were found in 7% (7/98) of patients, compared to 30% (29/98) with kinase domain mutations.
- One patient with a T212R regulatory domain mutation showed in vitro resistance to TKIs and relapsed.
- Most other regulatory domain mutations did not significantly impact drug sensitivity or kinase activity.
Conclusions:
- BCR-ABL regulatory domain mutations are infrequent in CML patients treated with imatinib.
- While uncommon, these mutations can confer drug resistance and may explain treatment failure in some patients lacking kinase domain mutations.
- The T212R mutation highlights the potential role of regulatory domain alterations in CML treatment resistance.
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