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Updated: Jun 12, 2026

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Segmentation and Linear Measurement for Body Composition Analysis using Slice-O-Matic and Horos
Published on: March 21, 2021
Between-slice intervals in quantification of adipose tissue and muscle in children
Wei Shen1, Jun Chen, Sofia Kwak
1Obesity Research Center, St Luke's-Roosevelt Hospital and Institute of Human Nutrition, Columbia University College of Physicians and Surgeons, New York, USA. WS2003@Columbia.edu
Summary
The 5 cm whole-body MRI protocol is suitable for pediatric group comparisons of adipose tissue (AT) and skeletal muscle (SM). However, smaller intervals are needed for precise individual comparisons of visceral (VAT) and intermuscular AT (IMAT).
Area of Science:
- Pediatric imaging
- Body composition analysis
- Biomedical engineering
Background:
- Magnetic Resonance Imaging (MRI) is vital for in vivo quantification of adipose tissue (AT) and skeletal muscle (SM) in children.
- The applicability of the adult 5 cm whole-body MRI protocol in pediatric populations remains uncertain.
Purpose of the Study:
- To evaluate the appropriateness of the 5 cm whole-body MRI protocol for pediatric body composition analysis.
- To compare the accuracy of different MRI slice intervals for quantifying AT and SM in children.
Main Methods:
- Whole-body MRI with continuous 1 cm slices was performed on 73 healthy children (aged 5-17).
- Images were segmented into subcutaneous AT (SAT), visceral AT (VAT), intermuscular AT (IMAT), and SM.
- Volumes were compared between continuous acquisition and estimated protocols with 2, 3, 4, and 5 cm intervals.
Main Results:
- Percentage differences in volume measurements increased with larger slice intervals, depot size, weight, and BMI percentile.
- For group comparisons, a 5 cm interval protocol requires <5.4% more subjects for equivalent statistical power compared to a 1 cm protocol.
- Individual comparisons showed reliable detection of SM/SAT volume differences of 1-5% (0.14-0.64 L) and VAT/IMAT differences of 10-30% (0.06-0.21 L) with interval protocols.
Conclusions:
- The 5 cm MRI protocol is accurate for group comparisons of SM and SAT in children, similar to contiguous protocols.
- For individual comparisons, the 5 cm protocol is adequate for SM and SAT but less accurate for VAT and IMAT.
- Smaller slice intervals are recommended for precise individual VAT and IMAT quantification in pediatric populations.
