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Updated: Jun 12, 2026

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
GeneXpert captures unstable methicillin-resistant Staphylococcus aureus prone to rapidly losing the mecA gene
Diana E Ciardo1, Sibylle Burger, Michael Payer
1Institute of Medical Microbiology, University of Zürich, Zurich, Switzerland. diana.ciardo@viollier.ch
Abstract:
A cefoxitin-susceptible Staphylococcus aureus strain was identified by the Cepheid GeneXpert as methicillin-resistant S. aureus (MRSA). This strain was highly unstable and rapidly lost SCCmec upon subculturing in vitro, indicating that unstable MRSA is best detected by gene amplification-based methods.
Insights
Unstable methicillin-resistant Staphylococcus aureus (MRSA) can be misidentified. Gene amplification methods are best for detecting this rapidly changing MRSA strain.
Area of Science:
- Microbiology
- Molecular Biology
- Clinical Diagnostics
Background:
- Accurate identification of methicillin-resistant Staphylococcus aureus (MRSA) is crucial for effective treatment and infection control.
- Standard diagnostic methods may face challenges with certain MRSA strains.
Observation:
- A cefoxitin-susceptible Staphylococcus aureus strain was initially identified as MRSA using the Cepheid GeneXpert system.
- This specific MRSA strain exhibited high instability, rapidly losing its SCCmec genetic element during in vitro subculturing.
Findings:
- The observed instability highlights a limitation in identifying certain MRSA strains with conventional susceptibility testing.
- Rapid loss of SCCmec suggests that the genetic basis for methicillin resistance can be transient in some S. aureus isolates.
Implications:
- Gene amplification-based methods, such as those used by the GeneXpert, are superior for detecting unstable MRSA.
- These findings underscore the importance of utilizing molecular diagnostic tools for accurate and timely MRSA detection, especially in cases of suspected instability.
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