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Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
[Case of subdural empyema caused by Porphyromonas and Fusobacterium identified by 16S ribosomal RNA gene sequence
Saiko Aiba1, Yuka Watanabe, Masaaki Odaka
1Department of Neurology, Dokkyo Medical University.
Abstract:
A 24-year-old woman presented subdural empyema developing from sinusitis caused by Porphyromonas and Fusobacterium infection. She experienced fever and progressive headache with gradually worsening symptoms. Neurological examination revealed drowsiness and neck stiffness. A CSF examination detected pleocytosis and a low glucose level. Gadolinium-enhanced T1-weighted images from brain MRI showed thickening enhancement at the leptomeninges in the left frontal to temporal lobes and interhemispheric fissure with edema. Based on the diagnosis of bacterial meningoencephalitis and subdural empyema developing from sinusitis primary to odontogenic infection, she received antibacterial chemotherapy with meropenem hydrate and vancomycin hydrochloride, after which motor aphasia and consciousness disturbance occurred. No bacteria were isolated from a trans-sphenoidal biopsy specimen and CSF culture. Molecular typing also was performed by sequencing the 16S ribosomal RNA intergenic spacer region, and Porphyromonas and Fusobacterium were identified. She was given cephalosporin and metronidazol, after which her neurological symptoms and signs gradually lessened. Physicians need to be aware that patients may develop subdural empyema subsequent to sinusitis associated with Porphyromonas and Fusobacterium infection and that amplification and sequence analysis of partial bacterial 16S ribosomal RNA gene should be examined when no bacteria is identified by culture.
Insights
A rare case of subdural empyema caused by Porphyromonas and Fusobacterium sinusitis is presented. Molecular typing identified bacteria when cultures failed, guiding treatment for this serious brain infection.
Area of Science:
- Neurology
- Infectious Diseases
- Microbiology
Background:
- Subdural empyema is a rare but serious complication of sinusitis.
- Odontogenic infections can lead to sinusitis and subsequent intracranial spread.
- Porphyromonas and Fusobacterium are anaerobic bacteria often implicated in head and neck infections.
Observation:
- A young woman presented with symptoms of meningitis and subdural empyema secondary to sinusitis.
- Initial diagnostic cultures from CSF and biopsy were negative.
- Brain MRI revealed leptomeningeal enhancement and edema consistent with infection.
Findings:
- Molecular typing (16S rRNA sequencing) identified Porphyromonas and Fusobacterium in the absence of positive cultures.
- Initial broad-spectrum antibiotics (meropenem, vancomycin) led to neurological deterioration.
- Subsequent targeted therapy with cephalosporin and metronidazole resulted in clinical improvement.
Implications:
- Clinicians should consider Porphyromonas and Fusobacterium as potential pathogens in subdural empyema secondary to sinusitis.
- 16S rRNA gene sequencing is a valuable tool for diagnosing infections when conventional cultures are negative.
- Early and accurate diagnosis and targeted antimicrobial therapy are crucial for favorable outcomes in brain infections.
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