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DNA-Tethered RNA Polymerase for Programmable In vitro Transcription and Molecular Computation
Published on: December 29, 2021
Architecture of the Tn7 posttransposition complex: an elaborate nucleoprotein structure
Jason W Holder1, Nancy L Craig
1Howard Hughes Medical Institute, Department of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, 725 North Wolfe Street, 502 PCTB, Baltimore, MD 21205, USA.
All four transposition proteins (TnsA, TnsB, TnsC, TnsD) are present in the posttransposition complex, mediating Tn7 transposition. Protein-protein contacts pair Tn7 ends, involving TnsB binding sites and extensive attTn7 DNA protection.
Area of Science:
- Molecular Biology
- Genetics
- Bacterial Transposons
Background:
- The bacterial transposon Tn7 undergoes site- and orientation-specific insertion into the attTn7 chromosomal site.
- Transposition is mediated by four proteins: TnsA, TnsB, TnsC, and TnsD.
Purpose of the Study:
- To identify the specific Tns proteins constituting the active transpososome.
- To elucidate the protein composition of the posttransposition complex (PTC).
Main Methods:
- Utilized fluorescently labeled Tns proteins to determine their presence in the PTC.
- Employed high-resolution DNA footprinting to analyze DNA-protein interactions.
Main Results:
- All four Tns proteins (TnsA, TnsB, TnsC, TnsD) are present in the PTC.
- Protein-protein contacts between Tns proteins were found to pair the Tn7 ends.
- Oligomers of TnsA, TnsB, and TnsC likely mediate transposition.
- Extensive DNA footprinting revealed ~350 bp of DNA at Tn7 ends and attTn7 are protected by Tns proteins.
- TnsB binding sites are occupied, with altered protection patterns suggesting end pairing and target complex interaction.
Conclusions:
- The PTC contains all four Tn7 transposition proteins, indicating their roles in the transposition process.
- Tn7 end pairing and interaction with the attTn7 target site are crucial for transposition.
- TnsD imposes alternative DNA structures on attTn7 that are maintained in the PTC.
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