Related Experiment Video
Updated: Jun 12, 2026

Preparation of Mycobacterium tuberculosis Culture Filtrate to Understand TB Pathogenesis
Published on: March 28, 2025
Role of a PAS sensor domain in the Mycobacterium tuberculosis transcription regulator Rv1364c
Ravi Kumar Jaiswal1, G Manjeera, B Gopal
1Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560012, India.
Abstract:
The Mycobacterium tuberculosis transcriptional regulator Rv1364c regulates the activity of the stress response sigma factor sigma(F). This multi-domain protein has several components: a signaling PAS domain and an effector segment comprising of a phosphatase, a kinase and an anti-anti-sigma factor domain. Based on Small Angle X-ray Scattering (SAXS) data, Rv1364c was recently shown to be a homo-dimer and adopt an elongated conformation in solution. The PAS domain could not be modeled into the structural envelope due to poor sequence similarity with known PAS proteins. The crystal structure of the PAS domain described here provides a structural basis for the dimerization of Rv1364c. It thus appears likely that the PAS domain regulates the anti-sigma activity of Rv1364c by oligomerization. A structural comparison with other characterized PAS domains reveal several sequence and conformational features that could facilitate ligand binding - a feature which suggests that the function of Rv1364c could potentially be governed by specific cellular signals or metabolic cues.
Insights
The Mycobacterium tuberculosis regulator Rv1364c
Area of Science:
- Molecular biology
- Structural biology
- Biochemistry
Background:
- Rv1364c is a Mycobacterium tuberculosis transcriptional regulator controlling the stress response sigma factor sigma(F).
- This protein possesses multiple domains, including a PAS domain, a phosphatase, a kinase, and an anti-anti-sigma factor domain.
- Previous Small Angle X-ray Scattering (SAXS) data indicated Rv1364c exists as a homo-dimer in an elongated conformation.
Purpose of the Study:
- To determine the crystal structure of the Rv1364c PAS domain.
- To elucidate the structural basis for Rv1364c dimerization.
- To investigate potential ligand-binding capabilities of the PAS domain.
Main Methods:
- X-ray crystallography to determine the PAS domain structure.
- Structural comparison with known PAS domains.
Main Results:
- The crystal structure of the Rv1364c PAS domain was determined.
- The structure provides a molecular basis for Rv1364c homo-dimerization.
- The PAS domain exhibits features suggesting potential ligand binding.
Conclusions:
- The Rv1364c PAS domain likely regulates anti-sigma activity through oligomerization.
- Rv1364c function may be modulated by cellular signals or metabolic cues.
- This structural insight contributes to understanding Mycobacterium tuberculosis gene regulation.
Related Concept Videos
RNA Polymerase II Accessory Proteins
Bacterial RNA Polymerase
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
Bacterial RNA Polymerase
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
Prokaryotic Transcriptional Activators and Repressors
Transcription of prokaryotic...
Prokaryotic Transcriptional Activators and Repressors
Transcription of prokaryotic...
Regulation of Bacterial Virulence

