Novel genetic context of multiple bla OXA-58 genes in Acinetobacter genospecies 3
B A Evans1, A Hamouda, K J Towner
1Faculty of Life Sciences, The University of Manchester, Manchester, UK.
Objectives:
The detection in Acinetobacter genospecies 3 isolates of OXA-type carbapenemases, resulting in reduced susceptibility to carbapenem antibiotics, is increasingly reported. We identified an Acinetobacter genospecies 3 isolate carrying the gene for OXA-58 and aimed to resolve the genetic environment surrounding the bla(OXA-58) gene.
Methods:
Species identification was confirmed by 16S-23S rRNA restriction analysis. MICs of imipenem, meropenem and ertapenem were determined, and the isolate was screened by PCR for bla(OXA-23-like), bla(OXA-40-like), bla(OXA-51-like) and bla(OXA-58-like) genes. The sequence surrounding bla(OXA-58) was determined through amplification by inverse PCR and genome walking followed by sequencing. Genetic localization was investigated by Southern blotting.
Results:
Isolate A164 was confirmed as belonging to Acinetobacter genospecies 3 and had reduced susceptibility to the carbapenems. The isolate was found to encode two bla(OXA-58) genes that may have been duplicated by the insertion sequence ISAba125, two copies of which were inserted into ISAba3 elements. The bla(OXA-58) genes appear to be plasmid borne.
Conclusions:
This is the first report of beta-lactamase duplication in Acinetobacter genospecies 3 and of gene duplication mediated by ISAba125.
Insights
Acinetobacter genospecies 3 isolates show reduced carbapenem susceptibility due to OXA-58 beta-lactamase duplication. This gene duplication, mediated by the insertion sequence ISAba125, is a novel finding in Acinetobacter.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Acinetobacter genospecies 3 isolates are increasingly reported with OXA-type carbapenemases, leading to reduced susceptibility to carbapenem antibiotics.
- Carbapenem resistance in Acinetobacter poses a significant threat to public health, necessitating research into resistance mechanisms.
Purpose of the Study:
- To investigate the genetic environment surrounding the bla(OXA-58) gene in an Acinetobacter genospecies 3 isolate.
- To characterize the mechanism of carbapenem resistance in the identified isolate.
Main Methods:
- Species identification using 16S-23S rRNA restriction analysis.
- Determination of minimum inhibitory concentrations (MICs) for imipenem, meropenem, and ertapenem.
- Screening for carbapenemase genes (bla(OXA-23-like), bla(OXA-40-like), bla(OXA-51-like), bla(OXA-58-like)) using PCR.
- Sequencing of the bla(OXA-58) genetic environment via inverse PCR and genome walking.
- Investigation of genetic localization using Southern blotting.
Main Results:
- Isolate A164 confirmed as Acinetobacter genospecies 3 with reduced carbapenem susceptibility.
- The isolate harbored two copies of the bla(OXA-58) gene, potentially duplicated by the insertion sequence ISAba125.
- Two copies of ISAba125 were inserted into ISAba3 elements, and the bla(OXA-58) genes were found to be plasmid-borne.
Conclusions:
- This study reports the first instance of beta-lactamase gene duplication in Acinetobacter genospecies 3.
- The findings highlight the role of the insertion sequence ISAba125 in mediating gene duplication events in Acinetobacter.
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