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Updated: Jun 12, 2026

SUMO-Binding Entities (SUBEs) as Tools for the Enrichment, Isolation, Identification, and Characterization of the SUMO Proteome in Liver Cancer
Published on: November 1, 2019
Identification of a molecular recognition feature in the E1A oncoprotein that binds the SUMO conjugase UBC9 and
A F Yousef1, G J Fonseca, P Pelka
1Department of Microbiology and Immunology, The University of Western Ontario, London, Ontario, Canada.
Abstract:
Hub proteins have central roles in regulating cellular processes. By targeting a single cellular hub, a viral oncogene may gain control over an entire module in the cellular interaction network that is potentially comprised of hundreds of proteins. The adenovirus E1A oncoprotein is a viral hub that interacts with many cellular hub proteins by short linear motifs/molecular recognition features (MoRFs). These interactions transform the architecture of the cellular protein interaction network and virtually reprogram the cell. To identify additional MoRFs within E1A, we screened portions of E1A for their ability to activate yeast pseudohyphal growth or differentiation. This identified a novel functional region within E1A conserved region 2 comprised of the sequence EVIDLT. This MoRF is necessary and sufficient to bind the N-terminal region of the SUMO conjugase UBC9, which also interacts with SUMO noncovalently and is involved in polySUMOylation. Our results suggest that E1A interferes with polySUMOylation, but not with monoSUMOylation. These data provide the first insight into the consequences of the interaction of E1A with UBC9, which was initially described in 1996. We further demonstrate that polySUMOylation regulates pseudohyphal growth and promyelocytic leukemia body reorganization by E1A. In conclusion, the interaction of the E1A oncogene with UBC9 mimics the normal binding between SUMO and UBC9 and represents a novel mechanism to modulate polySUMOylation.
Insights
Adenovirus E1A oncogene protein binds UBC9, interfering with polySUMOylation. This interaction regulates cell reprogramming and yeast pseudohyphal growth, revealing a novel viral mechanism.
Area of Science:
- Cellular biology
- Virology
- Molecular mechanisms
Background:
- Hub proteins are central regulators of cellular processes.
- Viral oncogenes, like adenovirus E1A, can reprogram cells by targeting cellular hubs.
- Short linear motifs/molecular recognition features (MoRFs) mediate interactions between viral oncogenes and cellular proteins.
Purpose of the Study:
- To identify novel functional regions (MoRFs) within the adenovirus E1A oncoprotein.
- To investigate the interaction between E1A and the SUMO conjugase UBC9.
- To elucidate the role of polySUMOylation in E1A-mediated cellular processes.
Main Methods:
- Screening of E1A portions for activation of yeast pseudohyphal growth.
- Identification of a novel MoRF (EVIDLT) in E1A conserved region 2.
- Assessing the binding of E1A MoRF to UBC9 and its effect on SUMOylation.
Main Results:
- A novel E1A MoRF (EVIDLT) was identified, binding to UBC9.
- E1A interaction with UBC9 interferes with polySUMOylation, not monoSUMOylation.
- PolySUMOylation was shown to regulate E1A-mediated pseudohyphal growth and PML body reorganization.
Conclusions:
- The E1A oncogene interacts with UBC9 via a novel MoRF, mimicking normal SUMO-UBC9 binding.
- This interaction provides a mechanism for viral modulation of cellular polySUMOylation.
- E1A's interference with polySUMOylation impacts cellular processes regulated by this modification.
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