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Chemically-blocked Antibody Microarray for Multiplexed High-throughput Profiling of Specific Protein Glycosylation in Complex Samples
Published on: May 4, 2012
A biotin label-based antibody array for high-content profiling of protein expression
Ruochun Huang1, Weidong Jiang, Jean Yang
1RayBiotech, Inc., Norcross, GA 30092, USA.
Cancer Genomics & Proteomics
|June 17, 2010
Summary
A new biotin label-based antibody array enables high-content protein profiling for biomarker discovery. This reliable and cost-effective method can simultaneously detect hundreds of proteins, aiding in identifying disease biomarkers like those for ovarian cancer.
Area of Science:
- Biotechnology
- Proteomics
- Biomarker Discovery
Background:
- Global protein profiling is crucial for biomedical research, drug development, and biomarker discovery.
- Existing antibody array systems lack reliability and high-content capabilities for analyzing numerous biological samples.
- A need exists for a sensitive, specific, user-friendly, and cost-effective protein profiling method.
Purpose of the Study:
- To develop a reliable, easy-to-use, and cost-effective high-content antibody array system.
- To profile protein expression levels with high sensitivity and specificity.
- To uncover potential biomarkers for ovarian cancer using the developed antibody array technology.
Main Methods:
- Developed a high-density antibody array utilizing biotin labeling for biological samples.
- Detected biotinylated proteins using streptavidin-conjugated fluorescent dye (Cy3 equivalent) reporter.
- Normalized signals via laser scanning with positive, negative, and internal controls.
Main Results:
- Simultaneously detected 507 human, 308 mouse, and 90 rat proteins at pg/ml to ng/ml levels with <20% variation.
- Screened 507 proteins in ovarian cancer patients and healthy individuals using human biotin-based antibody arrays.
- Identified a panel of proteins with significant expression differences (p<0.05) distinguishing ovarian cancer patients from controls.
Conclusions:
- The developed biotin label-based antibody arrays demonstrate significant potential for biomarker discovery applications.
- The system offers a reliable and high-content approach for protein expression profiling.
- This technology can aid in identifying novel biomarkers for diseases such as ovarian cancer.
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Labeling DNA Probes
DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
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