The ribonucleotide reductase inhibitor, Sml1, is sequentially phosphorylated, ubiquitylated and degraded in response

Bethany L Andreson1, Amitabha Gupta, Bilyana P Georgieva

  • 1Department of Biological Sciences, Columbia University, New York, NY 10027, USA.

Insights

DNA damage triggers the degradation of the RNR inhibitor Sml1, crucial for cell survival. This study identifies key phosphorylation sites and proteasomal pathways essential for Sml1 regulation and genome stability.

Area of Science:

  • Molecular Biology
  • Cellular Biology
  • Genetics

Background:

  • Ribonucleotide reductase (RNR) activity is tightly regulated to maintain genome integrity during genotoxic stress.
  • The Mec1/Rad53/Dun1 kinase cascade controls RNR, including the RNR inhibitor Sml1.
  • DNA damage induces Sml1 degradation, increasing dNTP pools via RNR.

Purpose of the Study:

  • To investigate the molecular requirements for Sml1 degradation following DNA damage.
  • To identify specific phosphorylation sites on Sml1 critical for its in vivo regulation.
  • To elucidate the ubiquitylation and proteasomal pathways involved in Sml1 turnover.

Main Methods:

  • Site-directed mutagenesis to identify critical phosphorylation sites on Sml1.
  • Analysis of Sml1 degradation in response to DNA damage using mutant strains.
  • Investigating the role of the 26S proteasome, E2/E3 ligases (Rad6, Ubr2), and Mub1 in Sml1 degradation.

Main Results:

  • Several in vivo phosphorylation sites on Sml1 were identified as essential for its degradation after DNA damage.
  • Mutating these sites in Sml1 leads to lethality in conjunction with an rnr1-W688G mutation.
  • Sml1 degradation is dependent on the 26S proteasome, the E2 enzyme Rad6, the E3 ligase Ubr2, and Mub1.

Conclusions:

  • Sml1 degradation is a critical DNA damage response pathway regulated by specific phosphorylation events.
  • The Rad6/Ubr2/Mub1 complex plays a key role in the ubiquitylation and proteasomal degradation of phosphorylated Sml1.
  • Understanding Sml1 regulation is vital for maintaining cell survival and genome stability under genotoxic stress.

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