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Alfalfa mosaic virus: coat protein-dependent initiation of infection
1Institute of Molecular Plant Sciences, Gorlaeus Laboratories, Leiden University, PO Box 9502, 2300 RA Leiden, the Netherlands.
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SUMMARY Taxonomy: Alfalfa mosaic virus (AMV) is the type species of the genus Alfamovirus and belongs to the family Bromoviridae. In this family, the tripartite RNA genomes of bromo-, cucumo- and probably oleaviruses are infectious as such, whereas infection with the three genomic RNAs of alfamo- and ilarviruses requires addition to the inoculum of a few molecules of coat protein (CP) per RNA molecule. RNAs 1 and 2 encode the replicase proteins P1 and P2, RNA 3 encodes the movement protein and CP. CP is translated from the subgenomic RNA 4. Physical properties: RNAs 1 (3.65 kb), 2 (2.6 kb) and 3 (2.2 kb) are separately encapsidated into bacilliform particles which are 19 nm wide and 35-56 nm long. In addition, the virus preparations contain spheroidal particles each containing two copies of RNA 4 (0.88 kb). Virus particles contain 16-17% RNA and are mainly stabilized by protein-RNA interactions. The 3'-termini of the viral RNAs contain a homologous sequence of 145 nucleotides that can adopt two alternative conformations: one represents a high-affinity binding site for CP, the other resembles a tRNA-like structure and is required for minus-strand promoter activity. Hosts: AMV mostly infects herbaceous plants, but several woody species are included in the natural host range. The experimental and natural host ranges include over 600 species in 70 families. At least 15 aphid species are known to transmit the virus in the stylet-borne or non-persistent manner. Economic importance: AMV is a significant pathogen in alfalfa and sweet clover and can spread from these forages to neighbouring crops like pepper, tobacco or soybean. The recent introduction of the soybean aphid (Aphis glycines) in the mid-west states of the USA has increased the incidence of AMV in soybean. AMV occurs world-wide in potato and is referred to as 'calico mosaic' because of its characteristic symptoms on the foliage. However, the economic importance of AMV in potato is limited.
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Alfalfa mosaic virus (AMV) requires coat protein for infection and has diverse hosts. Its RNA structure is key to its replication and transmission by aphids.
Area of Science:
- Plant Virology
- Molecular Biology
- Microbiology
Background:
- Alfalfa mosaic virus (AMV) is the type species of the Alfamovirus genus.
- AMV belongs to the Bromoviridae family, characterized by tripartite RNA genomes.
- Unlike other viruses in its family, AMV requires exogenous coat protein (CP) for infection.
Purpose of the Study:
- To detail the taxonomy, physical properties, host range, and economic importance of Alfalfa mosaic virus (AMV).
- To elucidate the structural and functional characteristics of AMV's RNA genomes and coat protein.
- To understand the transmission dynamics and host-pathogen interactions of AMV.
Main Methods:
- Genomic RNA analysis (RNAs 1, 2, 3, and subgenomic RNA 4).
- Characterization of viral particle structure and composition.
- Host range determination through experimental and natural infection studies.
- Identification of aphid vectors and transmission modes.
Main Results:
- AMV genome consists of three infectious RNAs, with CP translated from RNA 4.
- Viral particles are bacilliform and spheroidal, containing 16-17% RNA.
- The 3'-termini of viral RNAs exhibit dual conformations for CP binding and tRNA-like structures.
- AMV infects over 600 plant species and is transmitted by at least 15 aphid species.
- AMV significantly impacts alfalfa, sweet clover, pepper, tobacco, and soybean, with increasing incidence in soybean due to the soybean aphid.
Conclusions:
- AMV's unique reliance on coat protein for infectivity and its complex RNA structure are critical for its life cycle.
- The virus's broad host range and efficient aphid transmission contribute to its widespread distribution and economic significance.
- Understanding AMV's biology is crucial for managing its impact on agricultural crops.
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