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A Restriction Enzyme Based Cloning Method to Assess the In vitro Replication Capacity of HIV-1 Subtype C Gag-MJ4 Chimeric Viruses
Published on: August 31, 2014
Differences in HIV type 1 RNA plasma load profile of closely related cocirculating Ethiopian subtype C strains: C and
Workenesh Ayele1, Yared Mekonnen, Tsehaynesh Messele
1Ethiopian Health and Nutrition Research Institute (EHNRI), Addis Ababa, Ethiopia.
Insights
HIV-1 subtype C
Area of Science:
- Virology
- Immunology
- Epidemiology
Background:
- Two distinct subclusters of HIV-1 subtype C, designated C and C', circulate in Ethiopia.
- Limited understanding exists regarding the biological and clinical distinctions between these two subclusters.
Purpose of the Study:
- To longitudinally compare the clinical and virological differences between HIV-1 subtype C and C' infections in Ethiopian individuals.
- To investigate the factors contributing to the differential prevalence of these subclusters.
Main Methods:
- Longitudinal monitoring of viral loads and CD4(+) T cell counts in 130 treatment-naive Ethiopian individuals over five years.
- Genetic subtyping to differentiate between HIV-1 subclusters C and C'.
Main Results:
- Subcluster C' was the predominant genotype (72.3%).
- Subcluster C' showed higher viral loads at high CD4(+) T cell counts (500-900 cells/mm(3)), while subcluster C had higher viral loads at low CD4(+) T cell counts (0-150 cells/mm(3)).
- Individuals infected with subcluster C experienced a higher mortality rate.
Conclusions:
- HIV-1 subcluster C infection is associated with a more rapid disease progression, despite initially lower viral loads.
- The distinct viral load dynamics observed in subcluster C' infections may explain its higher prevalence in Ethiopia.
Abstract:
Two HIV-1 subtype C subclusters have been identified in Ethiopia (C and C') with little knowledge regarding their biological or clinical differences. We longitudinally monitored HIV-1 viral loads and CD4(+) T cell counts for 130 subtype C-infected individuals from Ethiopia over 5 years. The genetic subclusters C and C' were determined and comparisons were made between the groups. None of the study individuals received antiretroviral therapy. Subcluster C' was found to be the more prevalent (72.3%) genotype circulating. Individuals infected with subcluster C' harbored higher viral loads in comparison to subcluster C-infected individuals when the CD4(+) T cell counts were high (500-900 cells/mm(3)), whereas at low CD4(+) T cell counts (0-150 cells/mm(3)) individuals infected with subcluster C viruses showed higher viral loads. We identified a greater number of deaths among individuals infected with subcluster C viruses in comparison to C'. Our results indicate that infection with subcluster C viruses leads to a more rapid onset of disease, despite the initial lower HIV-1 RNA plasma loads. Additionally, the higher viral loads seen for HIV-1 subcluster C' infections at higher CD4(+) T cell counts can help explain the higher prevalence of this subtype in Ethiopia.
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