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Updated: Jun 10, 2026

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
A shared DNA-damage-response pathway for induction of stem-cell death by UVB and by gamma irradiation
T Furukawa1, M J Curtis, C M Tominey
1Department of Plant Biology, University of California-Davis, CA, USA.
Abstract:
Both UVB radiation and DNA-breaking agents were previously reported to kill Arabidopsis stem cells. We demonstrate that death induced by UVB or by ionizing radiation (IR) requires Suppressor of Gamma Response 1 (SOG1), a transcription factor already found to govern many responses to these agents in Arabidopsis. DNA-damage responses (DDRs) triggered primarily by replication-blocking photoadducts or double-strand-breaks thus converge to a shared programmed-cell-death (PCD) pathway. Both UVB- and IR-induced PCD also require functional DDR protein kinases. Employment of atr atm mutants (uniquely available in Arabidopsis) shows that either ATR (which recognizes ssDNA) or ATM (which recognizes DSBs) suffices for PCD induction by either agent. Thus, DNA damage made by UVB or by IR engenders both ATM-activating and ATR-activating structures. The elevated PCD in UVB-irradiated atr and atm mutants suggests that in wt plants ATR and/or ATM may activate both pathways that avert PCD and those that elicit it. The similar PCD levels induced by roughly 30,000 unrepaired photoadducts vs. 20 IR-induced DSBs indicate that DDR damage-tolerance activities in this model stem-cell niche are remarkably efficient.
Insights
UVB radiation and ionizing radiation (IR) trigger programmed cell death (PCD) in Arabidopsis stem cells via the SOG1 pathway. Both ATM and ATR kinases are crucial for this DNA damage response.
Area of Science:
- Plant Biology
- Molecular Biology
- Genetics
Background:
- UVB radiation and DNA-breaking agents induce cell death in Arabidopsis stem cells.
- The transcription factor Suppressor of Gamma Response 1 (SOG1) regulates responses to DNA damage.
Purpose of the Study:
- To investigate the convergence of DNA damage response pathways leading to programmed cell death (PCD) in Arabidopsis stem cells.
- To determine the roles of ATR and ATM kinases in UVB- and IR-induced PCD.
Main Methods:
- Utilizing Arabidopsis mutants atr and atm to study DNA damage responses.
- Comparing PCD levels induced by UVB and ionizing radiation (IR).
Main Results:
- UVB and IR-induced cell death requires SOG1, indicating a shared PCD pathway.
- Both ATR and ATM kinases are necessary for PCD induction by either UVB or IR.
- Mutant analysis suggests ATR and ATM can activate both pro-survival and pro-death pathways.
Conclusions:
- DNA damage responses to UVB and IR converge on a common SOG1-dependent PCD pathway.
- ATR and ATM play critical roles in mediating PCD following DNA damage.
- Arabidopsis stem cells exhibit efficient damage tolerance mechanisms.
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